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用于癌症治疗的酶——大肠杆菌L-天冬酰胺酶的晶体结构。

Crystal structure of Escherichia coli L-asparaginase, an enzyme used in cancer therapy.

作者信息

Swain A L, Jaskólski M, Housset D, Rao J K, Wlodawer A

机构信息

Macromolecular Structure Laboratory, National Cancer Institute-Frederick Cancer Research and Development Center, MD 21702-1201.

出版信息

Proc Natl Acad Sci U S A. 1993 Feb 15;90(4):1474-8. doi: 10.1073/pnas.90.4.1474.

DOI:10.1073/pnas.90.4.1474
PMID:8434007
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC45896/
Abstract

The crystal structure of Escherichia coli asparaginase II (EC 3.5.1.1), a drug (Elspar) used for the treatment of acute lymphoblastic leukemia, has been determined at 2.3 A resolution by using data from a single heavy atom derivative in combination with molecular replacement. The atomic model was refined to an R factor of 0.143. This enzyme, active as a homotetramer with 222 symmetry, belongs to the class of alpha/beta proteins. Each subunit has two domains with unique topological features. On the basis of present structural evidence consistent with previous biochemical studies, we propose locations for the active sites between the N- and C-terminal domains belonging to different subunits and postulate a catalytic role for Thr-89.

摘要

大肠杆菌天冬酰胺酶II(EC 3.5.1.1)是一种用于治疗急性淋巴细胞白血病的药物(爱施巴),其晶体结构已通过使用来自单个重原子衍生物的数据并结合分子置换法在2.3埃分辨率下确定。原子模型被精修至R因子为0.143。这种酶作为具有222对称的同四聚体具有活性,属于α/β蛋白类别。每个亚基有两个具有独特拓扑特征的结构域。基于与先前生化研究一致的当前结构证据,我们提出了属于不同亚基的N端和C端结构域之间活性位点的位置,并假定苏氨酸-89具有催化作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/61d6/45896/5be3ee5dff39/pnas01102-0348-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/61d6/45896/650c7792732f/pnas01102-0347-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/61d6/45896/7c4392338a25/pnas01102-0347-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/61d6/45896/5be3ee5dff39/pnas01102-0348-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/61d6/45896/650c7792732f/pnas01102-0347-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/61d6/45896/7c4392338a25/pnas01102-0347-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/61d6/45896/5be3ee5dff39/pnas01102-0348-a.jpg

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本文引用的文献

1
Crystallographic R factor refinement by molecular dynamics.利用分子动力学进行晶体学 R 因子精修。
Science. 1987 Jan 23;235(4787):458-60. doi: 10.1126/science.235.4787.458.
2
Surgery's relevance to an understanding of basic biology. Tissue repair and cellular regeneration.
JAMA. 1967 Oct 9;202(2):116-7.
3
Structure of subtilisin BPN' at 2.5 angström resolution.枯草杆菌蛋白酶BPN'在2.5埃分辨率下的结构
Nature. 1969 Jan 18;221(5177):235-42. doi: 10.1038/221235a0.
两种L-天冬酰胺酶II变体之间的生化和生物物理差异:将EcA2-K12用作生物类似药的潜力
Biochemistry. 2025 Jul 15;64(14):3015-3029. doi: 10.1021/acs.biochem.4c00663. Epub 2025 Apr 16.
4
Towards a dependable data set of structures for L-asparaginase research.致力于建立一个可靠的 L-天冬酰胺酶结构数据集。
Acta Crystallogr D Struct Biol. 2024 Jul 1;80(Pt 7):506-527. doi: 10.1107/S2059798324005461. Epub 2024 Jun 27.
5
A Structural In Silico Analysis of the Immunogenicity of L-Asparaginase from .结构计算免疫原性分析 L-门冬酰胺酶从.
Int J Mol Sci. 2024 Apr 27;25(9):4788. doi: 10.3390/ijms25094788.
6
Probing the active site of Class 3 L-asparaginase by mutagenesis. I. Tinkering with the zinc coordination site of ReAV.通过诱变探究3类L-天冬酰胺酶的活性位点。I. 对重组嗜热栖热菌天冬酰胺酶(ReAV)的锌配位位点进行微调。
Front Chem. 2024 Apr 4;12:1381032. doi: 10.3389/fchem.2024.1381032. eCollection 2024.
7
RrA, an enzyme from Rhodospirillum rubrum, is a prototype of a new family of short-chain L-asparaginases.来自红假单胞菌的 RrA 酶是一个新的短链 L-天冬酰胺酶家族的原型。
Protein Sci. 2024 Apr;33(4):e4920. doi: 10.1002/pro.4920.
8
Biochemical characterization of L-asparaginase isoforms from -the boosting effect of zinc.来自锌的增强作用的L-天冬酰胺酶同工型的生化特性
Front Chem. 2024 Feb 22;12:1373312. doi: 10.3389/fchem.2024.1373312. eCollection 2024.
9
Quality comparison of a state-of-the-art preparation of a recombinant L-asparaginase derived from Escherichia coli with an alternative asparaginase product.一种源自大肠杆菌的重组 L-天冬酰胺酶的最先进制剂与另一种天冬酰胺酶产品的质量比较。
PLoS One. 2023 Jun 15;18(6):e0285948. doi: 10.1371/journal.pone.0285948. eCollection 2023.
10
Profiling Enzyme Activity of l-Asparaginase II by NMR-Based Methyl Fingerprinting at Natural Abundance.基于天然丰度的 NMR 甲基指纹图谱分析 l-天冬酰胺酶 II 的酶活性。
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4
Physicochemical studies of L-asparaginase from Erwinia carotovora.胡萝卜软腐欧文氏菌L-天冬酰胺酶的物理化学研究。
Nature. 1969 Nov 8;224(5219):594-5. doi: 10.1038/224594a0.
5
Two L-asparaginases from E. coli and their action against tumors.来自大肠杆菌的两种L-天冬酰胺酶及其抗肿瘤作用。
Proc Natl Acad Sci U S A. 1966 Nov;56(5):1516-9. doi: 10.1073/pnas.56.5.1516.
6
Localization of the two-L-asparaginases in anaerobically grown Escherichia coli.
J Biol Chem. 1967 Aug 25;242(16):3753-5.
7
l-asparaginase resistance in human leukemia--asparagine synthetase.人类白血病中对L-天冬酰胺酶的耐药性——天冬酰胺合成酶
Biochem Pharmacol. 1969 Oct;18(10):2578-80. doi: 10.1016/0006-2952(69)90375-x.
8
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Eur J Biochem. 1971 Jun 11;20(3):432-7. doi: 10.1111/j.1432-1033.1971.tb01410.x.
9
Production of L-asparaginase II by Escherichia coli.大肠杆菌生产L-天冬酰胺酶II
J Bacteriol. 1968 Dec;96(6):2043-8. doi: 10.1128/jb.96.6.2043-2048.1968.
10
Crystallographic studies on L-asparaginase from Proteus vulgaris. I. Preliminary crystal data.普通变形杆菌L-天冬酰胺酶的晶体学研究。I. 初步晶体数据。
J Biol Chem. 1973 Nov 10;248(21):7620-1.