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一种用于检测苹果木中病原菌的、对异形柱孢菌特异的PCR引物。

A PCR primer-specific to Cylindrocarpon heteronema for detection of the pathogen in apple wood.

作者信息

Brown A E, Muthumeenakshi S, Sreenivasaprasad S, Mills P R, Swinburne T R

机构信息

Department of Applied Plant Science, Queen's University of Belfast, UK.

出版信息

FEMS Microbiol Lett. 1993 Mar 15;108(1):117-20. doi: 10.1111/j.1574-6968.1993.tb06083.x.

DOI:10.1111/j.1574-6968.1993.tb06083.x
PMID:8472919
Abstract

An oligonucleotide primer (ChInt) was synthesised from the variable internally transcribed spacer (ITS) 1 region of ribosomal DNA (rDNA) of Cylindrocarpon heteronema. PCR with primers ChInt and ITS4 (from a conserved sequence of the rDNA) amplified a 470-bp fragment from several isolates of C. heteronema but not from various apple wood saprophytes. Amplification of this fragment was achieved from 1-2 pg of fungal DNA. These primers amplified a fragment of the same size from DNA extracted from cankered wood but only after impurities were removed from the DNA on a Qiagen tip-5 column. Southern hybridization analysis confirmed the 470-bp fragment from C. heteronema DNA and cankered wood to be identical.

摘要

从柱孢属异形根霉菌核糖体DNA(rDNA)的可变内部转录间隔区(ITS)1区域合成了一个寡核苷酸引物(ChInt)。用引物ChInt和ITS4(来自rDNA的保守序列)进行PCR,从多个异形根霉菌分离株中扩增出一个470bp的片段,但从各种苹果木腐生菌中未扩增出该片段。从1-2pg的真菌DNA中实现了该片段的扩增。这些引物从溃疡木提取的DNA中扩增出相同大小的片段,但前提是在Qiagen tip-5柱上从DNA中去除杂质之后。Southern杂交分析证实,来自异形根霉菌DNA和溃疡木的470bp片段是相同的。

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