Ernst P, Hahm K, Smale S T
Howard Hughes Medical Institute, Department of Microbiology and Immunology, UCLA School of Medicine 90024-1662.
Mol Cell Biol. 1993 May;13(5):2982-92. doi: 10.1128/mcb.13.5.2982-2992.1993.
Terminal deoxynucleotidyltransferase (TdT) is a template-independent DNA polymerase that is expressed transiently during the earliest stages of B- and T-cell ontogeny. Previously, we characterized the promoter for the murine TdT gene and identified a novel DNA-binding protein, called LyF-1, that interacts with a DNA sequence element found to be critical for transcriptional activity in lymphoid cell lines. Here, we present a more detailed analysis of this 30-bp control element, called the TdT D' element, which is centered approximately 60 bp upstream of the transcription start site. We found that both the murine and human D' elements are recognized by multiple proteins, including LyF-1 and at least two Ets family proteins, Ets-1 and Fli-1. Additional protein-DNA interactions were identified through studies using unfractionated nuclear extracts, in which the D' element was apparently incorporated into a multiprotein complex, possibly containing an Ets protein as a core component. By analyzing a series of substitution mutations, two adjacent binding sites for LyF-1 were identified in the murine D' element, with the Ets protein binding site closely coinciding with the proximal, lower-affinity LyF-1 site. Transient transfection analysis with these mutations revealed that only a 10-bp region, containing precisely the Ets and proximal LyF-1 binding sites, was needed for D' activity. These results suggest an important role for an Ets family protein in the expression of the TdT gene. The role of LyF-1 is less clear; it might act in conjunction with the Ets protein bound at the D' element or it might be unnecessary for D' activity.
末端脱氧核苷酸转移酶(TdT)是一种不依赖模板的DNA聚合酶,在B细胞和T细胞个体发育的最早阶段短暂表达。此前,我们对小鼠TdT基因的启动子进行了表征,并鉴定了一种名为LyF-1的新型DNA结合蛋白,它与一个对淋巴样细胞系转录活性至关重要的DNA序列元件相互作用。在此,我们对这个30bp的控制元件(称为TdT D'元件)进行了更详细的分析,该元件位于转录起始位点上游约60bp处。我们发现,小鼠和人类的D'元件都能被多种蛋白质识别,包括LyF-1以及至少两种Ets家族蛋白Ets-1和Fli-1。通过使用未分级核提取物的研究鉴定了其他蛋白质-DNA相互作用,其中D'元件显然被纳入了一个多蛋白复合物中,该复合物可能以一种Ets蛋白作为核心成分。通过分析一系列替代突变,在小鼠D'元件中鉴定出了两个相邻的LyF-1结合位点,Ets蛋白结合位点与近端、低亲和力的LyF-1位点紧密重合。对这些突变进行的瞬时转染分析表明,D'活性仅需要一个精确包含Ets和近端LyF-1结合位点的10bp区域。这些结果表明Ets家族蛋白在TdT基因表达中起重要作用。LyF-1的作用尚不清楚;它可能与结合在D'元件上的Ets蛋白协同作用,也可能对D'活性来说是不必要的。