Bahnson B J, Park D H, Kim K, Plapp B V, Klinman J P
Department of Chemistry, University of California, Berkeley 94720.
Biochemistry. 1993 Jun 1;32(21):5503-7. doi: 10.1021/bi00072a003.
Primary and secondary kD/kT and kH/kT kinetic isotope effects have been studied as a probe of hydrogen tunneling in the oxidation of benzyl alcohol catalyzed by horse liver alcohol dehydrogenase (LADH). In the case of the wild-type enzyme, isotope effects at 25 degrees C do not clearly support hydrogen tunneling; this result is consistent with a reaction rate that is partially limited by the release of product benzaldehyde. The three-dimensional structure for LADH was used to design site-directed mutations in an effort to enhance the rate of the product release step and to "unmask" tunneling. Substitutions that increased the size of the alcohol binding pocket resulted in minor changes in isotope effects. By contrast, reduction in the size of the alcohol binding pocket through substitution at residues 57 and 93, which are in van der Waals contact with bound alcohol substrate, produced a clear demonstration of protium tunneling from the breakdown of the semiclassical relationship between kD/kT and kH/kT isotope effects. The temperature dependence of kD/kT isotope effects has also been pursued, leading to the conclusion that tunneling does, in fact, occur in the reaction catalyzed by wild-type LADH. Despite the unmasking of protium tunneling in site-directed mutants, substitutions that decrease the size of the alcohol pocket appear to result in less extensive tunneling in the hydride transfer. It is noteworthy that the mutant enzyme (Leu57-->Phe), which shows the greatest evidence of tunneling, has the same catalytic efficiency (Vmax/Km) as the wild-type enzyme.(ABSTRACT TRUNCATED AT 250 WORDS)
一级和二级kD/kT及kH/kT动力学同位素效应已被研究,作为探究马肝醇脱氢酶(LADH)催化苄醇氧化过程中氢隧穿的探针。对于野生型酶而言,25摄氏度下的同位素效应并未明确支持氢隧穿;这一结果与部分受产物苯甲醛释放限制的反应速率一致。利用LADH的三维结构设计定点突变,以提高产物释放步骤的速率并“揭示”隧穿现象。增大醇结合口袋大小的取代导致同位素效应的微小变化。相比之下,通过取代与结合的醇底物处于范德华接触的57位和93位残基来减小醇结合口袋的大小,从kD/kT和kH/kT同位素效应之间半经典关系的破坏中清晰地证明了质子隧穿。还研究了kD/kT同位素效应的温度依赖性,得出结论:事实上,野生型LADH催化的反应中确实发生了隧穿。尽管定点突变体中质子隧穿被揭示,但减小醇口袋大小的取代似乎导致氢化物转移中的隧穿范围减小。值得注意的是,显示出最明显隧穿证据的突变酶(Leu57→Phe)与野生型酶具有相同的催化效率(Vmax/Km)。