• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

南极假丝酵母脂肪酶B的晶体学和分子模拟研究揭示了仲醇的立体特异性口袋。

Crystallographic and molecular-modeling studies of lipase B from Candida antarctica reveal a stereospecificity pocket for secondary alcohols.

作者信息

Uppenberg J, Ohrner N, Norin M, Hult K, Kleywegt G J, Patkar S, Waagen V, Anthonsen T, Jones T A

机构信息

Department of Molecular Biology, Uppsala University, Sweden.

出版信息

Biochemistry. 1995 Dec 26;34(51):16838-51. doi: 10.1021/bi00051a035.

DOI:10.1021/bi00051a035
PMID:8527460
Abstract

Many lipases are potent catalysts of stereoselective reactions and are therefore of interest for use in chemical synthesis. The crystal structures of lipases show a large variation in the shapes of their active site environments that may explain the large variation in substrate specificity of these enzymes. We have determined the three-dimensional structure of Candida antarctica lipase B (CALB) cocrystallized with the detergent Tween 80. In another crystal form, the structure of the enzyme in complex with a covalently bound phosphonate inhibitor has been determined. In both structures, the active site is exposed to the external solvent. The potential lid-forming helix alpha 5 in CALB is well-ordered in the Tween 80 structure and disordered in the inhibitor complex. The tetrahedral intermediates of two chiral substrates have been modeled on the basis of available structural and biochemical information. The results of this study provide a structural explanation for the high stereoselectivity of CALB toward many secondary alcohols.

摘要

许多脂肪酶是立体选择性反应的高效催化剂,因此在化学合成中具有应用价值。脂肪酶的晶体结构显示其活性位点环境的形状存在很大差异,这可能解释了这些酶底物特异性的巨大差异。我们已经确定了南极假丝酵母脂肪酶B(CALB)与去污剂吐温80共结晶的三维结构。在另一种晶体形式中,已经确定了该酶与共价结合的膦酸酯抑制剂复合物的结构。在这两种结构中,活性位点都暴露于外部溶剂。CALB中潜在的形成盖子的α5螺旋在吐温80结构中排列有序,而在抑制剂复合物中则无序。基于现有的结构和生化信息,对两种手性底物的四面体中间体进行了建模。这项研究的结果为CALB对许多仲醇的高立体选择性提供了结构解释。

相似文献

1
Crystallographic and molecular-modeling studies of lipase B from Candida antarctica reveal a stereospecificity pocket for secondary alcohols.南极假丝酵母脂肪酶B的晶体学和分子模拟研究揭示了仲醇的立体特异性口袋。
Biochemistry. 1995 Dec 26;34(51):16838-51. doi: 10.1021/bi00051a035.
2
Creating space for large secondary alcohols by rational redesign of Candida antarctica lipase B.通过对南极假丝酵母脂肪酶B进行合理重新设计为大型仲醇创造空间。
Chembiochem. 2005 Jun;6(6):1051-6. doi: 10.1002/cbic.200400410.
3
Structural determinants defining common stereoselectivity of lipases toward secondary alcohols.
Can J Microbiol. 1995;41 Suppl 1:289-96. doi: 10.1139/m95-199.
4
Determination of absolute configuration of secondary alcohols using lipase-catalyzed kinetic resolutions.利用脂肪酶催化的动力学拆分法测定仲醇的绝对构型
Chirality. 2008 May 15;20(5):724-35. doi: 10.1002/chir.20543.
5
The sequence, crystal structure determination and refinement of two crystal forms of lipase B from Candida antarctica.南极假丝酵母脂肪酶B两种晶体形式的序列、晶体结构测定与精修
Structure. 1994 Apr 15;2(4):293-308. doi: 10.1016/s0969-2126(00)00031-9.
6
Molecular modeling and its experimental verification for the catalytic mechanism of Candida antarctica lipase B.南极假丝酵母脂肪酶B催化机制的分子模拟及其实验验证
J Microbiol Biotechnol. 2007 Jul;17(7):1098-105.
7
A structural basis for enantioselective inhibition of Candida rugosa lipase by long-chain aliphatic alcohols.长链脂肪醇对皱褶假丝酵母脂肪酶对映选择性抑制的结构基础。
Protein Sci. 1996 Jan;5(1):83-8. doi: 10.1002/pro.5560050110.
8
Molecular modeling of the enantioselectivity in lipase-catalyzed transesterification reactions.脂肪酶催化酯交换反应中对映选择性的分子模拟
Biophys J. 1998 Mar;74(3):1251-62. doi: 10.1016/S0006-3495(98)77839-7.
9
Template-based modeling of a psychrophilic lipase: conformational changes, novel structural features and its application in predicting the enantioselectivity of lipase catalyzed transesterification of secondary alcohols.嗜冷脂肪酶的基于模板建模:构象变化、新的结构特征及其在预测脂肪酶催化仲醇酯交换对映选择性中的应用
Biochim Biophys Acta. 2010 Dec;1804(12):2183-90. doi: 10.1016/j.bbapap.2010.08.012. Epub 2010 Sep 7.
10
Structure and conformational flexibility of Candida rugosa lipase.
Biochim Biophys Acta. 1999 Nov 23;1441(2-3):205-14. doi: 10.1016/s1388-1981(99)00152-3.

引用本文的文献

1
Biocatalyzed Synthesis of Benzoyl and Cinnamoylamides Inspired by Rice Phytoalexins.受水稻植保素启发的生物催化合成苯甲酰和肉桂酰胺
ACS Agric Sci Technol. 2025 Feb 24;5(4):461-467. doi: 10.1021/acsagscitech.4c00380. eCollection 2025 Apr 21.
2
Bis-pyrrolidone structures as versatile building blocks for the synthesis of bio-based polyesters and for the preparation of additives.双吡咯烷酮结构作为用于合成生物基聚酯和制备添加剂的通用结构单元。
Green Chem. 2025 Jan 3;27(7):1984-1996. doi: 10.1039/d4gc04951a. eCollection 2025 Feb 10.
3
Further Characterization of Lipase B from Ustilago maydis Expressed in Pichia pastoris: a Member of the Candida antarctica Lipase B-like Superfamily.
在毕赤酵母中表达的玉米黑粉菌脂肪酶B的进一步特性鉴定:南极假丝酵母脂肪酶B样超家族的一员
Appl Biochem Biotechnol. 2025 May;197(5):3108-3131. doi: 10.1007/s12010-024-05166-0. Epub 2025 Jan 17.
4
Interplay of Monosaccharide Configurations on the Deacetylation with Lipase-B.单糖构型对脂肪酶 B 去乙酰化作用的相互影响
J Org Chem. 2025 Jan 10;90(1):663-671. doi: 10.1021/acs.joc.4c02582. Epub 2024 Dec 29.
5
Prospective identification of extracellular triacylglycerol hydrolase with conserved amino acids in 's high G+C genomic dataset.在嗜热栖热放线菌的高G+C基因组数据集中对具有保守氨基酸的细胞外三酰甘油水解酶进行前瞻性鉴定。
Biotechnol Rep (Amst). 2024 Dec 7;45:e00869. doi: 10.1016/j.btre.2024.e00869. eCollection 2025 Mar.
6
Xylose Acetals - a New Class of Sustainable Solvents and Their Application in Enzymatic Polycondensation.木糖缩醛——一类新型可持续溶剂及其在酶促缩聚反应中的应用
ChemSusChem. 2025 Mar 15;18(6):e202401877. doi: 10.1002/cssc.202401877. Epub 2024 Nov 20.
7
Energetic and Kinetic Origins of CALB Interfacial Activation Revealed by PaCS-MD/MSM.通过PaCS-MD/MSM揭示CALB界面活化的能量和动力学起源
J Phys Chem B. 2023 Aug 31;127(34):7431-7441. doi: 10.1021/acs.jpcb.3c02041. Epub 2023 Aug 10.
8
Biocatalytic selective acylation of technical lignins: a new route for the design of new biobased additives for industrial formulations.工业木质素的生物催化选择性酰化:一种用于设计工业配方新型生物基添加剂的新途径。
Front Chem. 2023 Jul 21;11:1239479. doi: 10.3389/fchem.2023.1239479. eCollection 2023.
9
Immobilization of Lipase B from in Octyl-Vinyl Sulfone Agarose: Effect of the Enzyme-Support Interactions on Enzyme Activity, Specificity, Structure and Inactivation Pathway.在辛基乙烯砜琼脂糖中固定脂肪酶 B:酶-载体相互作用对酶活性、特异性、结构和失活动力学的影响。
Int J Mol Sci. 2022 Nov 17;23(22):14268. doi: 10.3390/ijms232214268.
10
Solvent-dependent activity of lipase B and its correlation with a regioselective mono aza-Michael addition - experimental and molecular dynamics simulation studies.脂肪酶B的溶剂依赖性活性及其与区域选择性单氮杂-Michael加成反应的相关性——实验与分子动力学模拟研究
Heliyon. 2022 Aug 19;8(8):e10336. doi: 10.1016/j.heliyon.2022.e10336. eCollection 2022 Aug.