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一种在活体细菌中分布式生产合成硝化蛋白的平台。

A platform for distributed production of synthetic nitrated proteins in live bacteria.

机构信息

Department of Chemical & Biomolecular Engineering, University of Delaware, Newark, DE, USA.

Systems, Synthetic, and Physical Biology Program, Rice University, Houston, TX, USA.

出版信息

Nat Chem Biol. 2023 Jul;19(7):911-920. doi: 10.1038/s41589-023-01338-x. Epub 2023 May 15.

Abstract

The incorporation of the nonstandard amino acid para-nitro-L-phenylalanine (pN-Phe) within proteins has been used for diverse applications, including the termination of immune self-tolerance. However, the requirement for the provision of chemically synthesized pN-Phe to cells limits the contexts where this technology can be harnessed. Here we report the construction of a live bacterial producer of synthetic nitrated proteins by coupling metabolic engineering and genetic code expansion. We achieved the biosynthesis of pN-Phe in Escherichia coli by creating a pathway that features a previously uncharacterized nonheme diiron N-monooxygenase, which resulted in pN-Phe titers of 820 ± 130 µM after optimization. After we identified an orthogonal translation system that exhibited selectivity toward pN-Phe rather than a precursor metabolite, we constructed a single strain that incorporated biosynthesized pN-Phe within a specific site of a reporter protein. Overall, our study has created a foundational technology platform for distributed and autonomous production of nitrated proteins.

摘要

将非标准氨基酸对硝基-L-苯丙氨酸(pN-Phe)掺入蛋白质中已被用于多种应用,包括终止免疫自身耐受。然而,需要向细胞提供化学合成的 pN-Phe 限制了该技术可以被利用的范围。在这里,我们通过结合代谢工程和遗传密码扩展,报告了一种合成硝化蛋白的活体细菌生产方法。我们通过创建一个具有以前未表征的非血红素二铁 N-单加氧酶的途径,在大肠杆菌中实现了 pN-Phe 的生物合成,优化后 pN-Phe 的产量达到 820±130µM。在我们确定了一种对 pN-Phe 而不是前体代谢物具有选择性的正交翻译系统后,我们构建了一个单一菌株,该菌株将生物合成的 pN-Phe 掺入报告蛋白的特定位点。总体而言,我们的研究为硝化蛋白的分布式和自主生产创建了一个基础技术平台。

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