Van Tang H, Pring D R, Muza F R, Yan B
Department of Plant Pathology and Plant Molecular and Cellular Biology Program, University of Florida, Gainesville, FL 32611, USA.
Curr Genet. 1996 Feb;29(3):265-74. doi: 10.1007/BF02221557.
We describe fundamental characteristics of sorghum mitochondrial orf25, urf209, and a related chimeric configuration, orf265/130, which is restricted to the IS1112C source of cytoplasmic male sterility in sorghum. Transcripts of urf209 are edited at ten nucleotides, resulting in nine amino-acid changes predicted from genomic sequences. The cDNA-predicted polypeptide product is 23.6 kDa, while Western blot analyses identify a product of 20k Da. Transcription of urf209 is characterized by one or two transcripts, dependent on nuclear background, but this difference is not related to male fertility status. The orf265/130 chimeric region includes 288 bp 95% identical to sequences 5' to maize T-cytoplasm T-urf13 and atp6, which includes a common transcription initiation site, and terminates with a recombinational event involving urf209. The urf209 similarity extends 189 bp, followed by sequences duplicated 5' to sorghum atp6-2. Sequences immediately 3' to the atp6-2 similarity include a second in-frame start codon, defining orf130. Structural features 5' to orf130 are shared with motifs found 5' to several translated mitochondrial open reading frames. The orf265/orf130 configuration is uniquely transcribed, and transcripts of orf130 exhibit one silent RNA editing event. Transcription in somatic cells is not altered by male fertility status.
我们描述了高粱线粒体orf25、urf209以及一种相关嵌合结构orf265/130的基本特征,该嵌合结构仅限于高粱细胞质雄性不育的IS1112C来源。urf209的转录本在十个核苷酸处发生编辑,导致根据基因组序列预测有九个氨基酸变化。cDNA预测的多肽产物为23.6 kDa,而蛋白质免疫印迹分析鉴定出一个20 kDa的产物。urf209的转录特征是有一个或两个转录本,这取决于核背景,但这种差异与雄性育性状态无关。orf265/130嵌合区域包括288 bp,与玉米T细胞质T-urf13和atp6 5'端的序列95%相同,其中包括一个共同的转录起始位点,并以涉及urf209的重组事件结束。urf209的相似性延伸189 bp,随后是高粱atp6-2 5'端重复的序列。atp6-2相似性序列紧接3'端的序列包括第二个符合读框的起始密码子,定义了orf130。orf130 5'端的结构特征与几个已翻译的线粒体开放阅读框5'端发现的基序相同。orf265/orf130结构独特转录,orf130的转录本表现出一个沉默的RNA编辑事件。体细胞中的转录不受雄性育性状态的影响。