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来自酿酒酵母六号染色体右臂30.8 kb区域的15个开放阅读框。

Fifteen open reading frames in a 30.8 kb region of the right arm of chromosome VI from Saccharomyces cerevisiae.

作者信息

Eki T, Naitou M, Hagiwara H, Abe M, Ozawa M, Sasanuma S, Sasanuma M, Tsuchiya Y, Shibata T, Watanabe K

机构信息

Division of Human Genome Research and Gene Bank, Tsukuba Life Science Center, Ibaraki, Japan.

出版信息

Yeast. 1996 Feb;12(2):177-90. doi: 10.1002/(SICI)1097-0061(199602)12:2%3C177::AID-YEA896%3E3.0.CO;2-A.

Abstract

The nucleotide sequence of cosmid clone 9765, which contains 30.8 kb of the right arm of chromosome VI, was determined. Both strands were sequenced, with an average redundancy of 8.17 per base pair by both dye primer and dye terminator cycle sequencing methods. The G+C content of the sequence was found to be 40.3%. Fifteen open reading frames (ORFs) greater than 100 amino acids and one tRNA-Tyr gene (SUP6) were detected. Seven of the ORFs were found to encode previously identified genes (HIS2, CDC14, MET10, SMC2, QCR6, PH04 and CDC26). One ORF, 9765orfF010, was found to encode a new member of the Snf2/Rad54 helicase family. Three ORFs (9765orfR002, 9765orfR011 and 9765orfR013) were found to be homologous with Schizosaccharomyces pombe polyadenylate binding protein, Escherichia coli hypothetical 38.1-kDa protein in the BCR 5' region, and transcription regulatory protein Swi3, respectively.

摘要

测定了黏粒克隆9765的核苷酸序列,该克隆包含第VI号染色体右臂的30.8 kb。两条链均进行了测序,通过染料引物和染料终止剂循环测序方法,每个碱基对的平均冗余度为8.17。发现该序列的G+C含量为40.3%。检测到15个大于100个氨基酸的开放阅读框(ORF)和一个tRNA-Tyr基因(SUP6)。发现其中7个ORF编码先前已鉴定的基因(HIS2、CDC14、MET10、SMC2、QCR6、PH04和CDC26)。发现一个ORF,即9765orfF010,编码Snf2/Rad54解旋酶家族的一个新成员。发现三个ORF(9765orfR002、9765orfR011和9765orfR013)分别与粟酒裂殖酵母聚腺苷酸结合蛋白、大肠杆菌BCR 5'区域假定的38.1 kDa蛋白以及转录调节蛋白Swi3同源。

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