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驱动蛋白的行走:一种具有弹性耦合头部的动态模型。

The kinesin walk: a dynamic model with elastically coupled heads.

作者信息

Derényi I, Vicsek T

机构信息

Department of Atomic Physics, Eötvös University, Budapest, Hungary.

出版信息

Proc Natl Acad Sci U S A. 1996 Jun 25;93(13):6775-9. doi: 10.1073/pnas.93.13.6775.

DOI:10.1073/pnas.93.13.6775
PMID:8692894
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC39103/
Abstract

Recently individual two-headed kinesin molecules have been studied in in vitro motility assays revealing a number of their peculiar transport properties. In this paper we propose a simple and robust model for the kinesin stepping process with elastically coupled Brownian heads that show all of these properties. The analytic and numerical treatment of our model results in a very good fit to the experimental data and practically has no free parameters. Changing the values of the parameters in the restricted range allowed by the related experimental estimates has almost no effect on the shape of the curves and results mainly in a variation of the zero load velocity that can be directly fitted to the measured data. In addition, the model is consistent with the measured pathway of the kinesin ATPase.

摘要

最近,单个双头驱动蛋白分子已在体外运动测定中得到研究,揭示了它们的许多独特运输特性。在本文中,我们提出了一个简单而稳健的驱动蛋白步移过程模型,该模型中弹性耦合的布朗头部展现出了所有这些特性。对我们模型的解析和数值处理与实验数据拟合得非常好,并且实际上没有自由参数。在相关实验估计所允许的受限范围内改变参数值,对曲线形状几乎没有影响,主要导致零负载速度的变化,而这可以直接与测量数据拟合。此外,该模型与驱动蛋白ATP酶的测量路径一致。

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引用本文的文献

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Cell Biochem Biophys. 2022 Mar;80(1):31-38. doi: 10.1007/s12013-021-01057-x. Epub 2022 Jan 28.
2
Minimum requirements for motility of a processive motor protein.进行性运动蛋白运动的最低要求。
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Exploring the dynamics of dimer crossing over a Kramers type potential.探索二聚体在 Kramers 型势垒上的交叉动力学。
J Chem Phys. 2012 Jan 14;136(2):025101. doi: 10.1063/1.3675920.
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Neck-linker docking coordinates the kinetics of kinesin's heads.颈连器对接协调了驱动蛋白头部的动力学。
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Kinesin is an evolutionarily fine-tuned molecular ratchet-and-pawl device of decisively locked direction.驱动蛋白是一种经过进化微调的分子棘轮棘爪装置,具有明确锁定的方向。
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Stepping and stretching. How kinesin uses internal strain to walk processively.行走与伸展。驱动蛋白如何利用内部张力进行连续行走。
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Cooperative behavior of molecular motors.分子马达的协同行为。
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A dynamical model of kinesin-microtubule motility assays.驱动蛋白-微管运动分析的动力学模型。
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The mechanochemistry of molecular motors.分子马达的机械化学
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A chemically reversible Brownian motor: application to kinesin and Ncd.一种化学可逆布朗马达:应用于驱动蛋白和Ncd蛋白
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Proc Natl Acad Sci U S A. 1993 Mar 1;90(5):1671-5. doi: 10.1073/pnas.90.5.1671.
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Force and velocity measured for single kinesin molecules.对单个驱动蛋白分子测量的力和速度。
Cell. 1994 Jun 3;77(5):773-84. doi: 10.1016/0092-8674(94)90060-4.