从深海细菌费氏弧菌SS9菌株中分离并鉴定压力调节孔蛋白样蛋白OmpL的结构基因
Isolation and characterization of the structural gene for OmpL, a pressure-regulated porin-like protein from the deep-sea bacterium Photobacterium species strain SS9.
作者信息
Welch T J, Bartlett D H
机构信息
Center for Marine Biomedicine and Biotechnology, Scripps Institution of Oceanography, University of California, San Diego, La Jolla 92093-0202, USA.
出版信息
J Bacteriol. 1996 Aug;178(16):5027-31. doi: 10.1128/jb.178.16.5027-5031.1996.
Abstract
Transposon-directed cloning was used to isolate the ompL gene from the deep-sea bacterium Photobacterium species strain SS9. The deduced amino acid sequence of OmpL displays sequence homology to porin proteins from enteric bacteria. Gene fusion and primer extension analyses indicate that ompL is transcriptionally regulated by pressure.
摘要
转座子定向克隆技术被用于从深海细菌费氏弧菌属菌株SS9中分离出ompL基因。OmpL推导的氨基酸序列与肠道细菌的孔蛋白显示出序列同源性。基因融合和引物延伸分析表明，ompL受压力转录调控。
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本文引用的文献
1
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Gene. 1993 Sep 6;131(1):125-8. doi: 10.1016/0378-1119(93)90680-2.
2
Use of a reporter gene to follow high-pressure signal transduction in the deep-sea bacterium Photobacterium sp. strain SS9.
J Bacteriol. 1993 Dec;175(23):7533-40. doi: 10.1128/jb.175.23.7533-7540.1993.
3
Stress response of Escherichia coli to elevated hydrostatic pressure.
J Bacteriol. 1993 Nov;175(22):7170-7. doi: 10.1128/jb.175.22.7170-7177.1993.
4
Cloning and constitutive expression of structural genes encoding gonococcal porin protein in Escherichia coli and attenuated Salmonella typhimurium vaccine strains.
Gene. 1994 Jan 28;138(1-2):43-50. doi: 10.1016/0378-1119(94)90781-1.
5
Effect of transposon-induced motility mutations on colonization of the host light organ by Vibrio fischeri.
J Bacteriol. 1994 Nov;176(22):6986-91. doi: 10.1128/jb.176.22.6986-6991.1994.
6
ompH gene expression is regulated by multiple environmental cues in addition to high pressure in the deep-sea bacterium Photobacterium species strain SS9.
J Bacteriol. 1995 Feb;177(4):1008-16. doi: 10.1128/jb.177.4.1008-1016.1995.
7
Genetic characterization of ompH mutants in the deep-sea bacterium Photobacterium sp. strain SS9.
Arch Microbiol. 1994;162(5):323-8. doi: 10.1007/BF00263779.
8
Construction of improved M13 vectors using oligodeoxynucleotide-directed mutagenesis.
Gene. 1983 Dec;26(1):101-6. doi: 10.1016/0378-1119(83)90040-9.
9
A unique mechanism regulating gene expression: translational inhibition by a complementary RNA transcript (micRNA).
Proc Natl Acad Sci U S A. 1984 Apr;81(7):1966-70. doi: 10.1073/pnas.81.7.1966.
10
Protein secretion in Escherichia coli.
Annu Rev Microbiol. 1985;39:615-48. doi: 10.1146/annurev.mi.39.100185.003151.
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