Murray B W, Takayama S, Schultz J, Wong C H
Department of Chemistry, Scripps Research Institute, La Jolla, California 92037, USA.
Biochemistry. 1996 Aug 27;35(34):11183-95. doi: 10.1021/bi961065a.
Human alpha-1,3-fucosyltransferase catalyzes the transfer of the L-fucose moiety from guanosine diphosphate-beta-L-fucose (GDP-Fuc) to acceptor sugars to form biologically important fucoglycoconjugates, including sialyl Lewis x (SLex). Evidence for a general base mechanism is supported by a pH-rate profile that revealed a catalytic residue with a pKa of 4.1. The characterized solvent kinetic isotope effect (Dv = 2.9, Dv/k = 2.1) in a proton inventory study indicates that only one-proton transfer is involved in the catalytic step leading to the formation of the transition state. Evidence for Mn2+ as an electrophilic catalyst was supported by the observation that the nonenzymatic transfer of L-fucose from GDP-Fuc to the hydroxyl group of water in the presence of 10 mM MnCl2 at 20 degrees C was accelerated from K(obs)= 3.5 x 10(-6) to 3.8 x 10(-5) min-1. Using the GDP-Fuc hydrolysis as the nonenzymatic rate, the enzymatic proficiency of FucT V, (Kcat/Ki,GDP-fuc. K(m),1.acNAc)/K(non), was estimated to be 1.2 x 10(10) M-1 with a transition-state affinity of 8.6 x 10(-11) M. The Km for Mn2+ was determined to be 6.1 mM, and alternative divalent metal cofactors were identified as Ca2+, Co2+, and Mg2+. Detailed kinetic characterization of the acceptor sugar specificity indicated that incorporation of hydrophobic functionality [e.g. -O-(CH2)5CO2CH3] to the reducing end of the acceptor sugar substantially decreased the K(m),acceptor by over 100-fold. The role of the nucleotide was investigated by studying the inhibition of nucleotides, including the guanosine series. The inhibitory potency trend (GTP approximately GDP > GMP > > guanosine) is consistent with bidentate chelation of Mn2+ by GDP-Fuc. The role of charge and distance in the synergistic inhibitory effect by the combination of GDP, an aza sugar, and the acceptor sugar was probed. A mechanism for fucosyl transfer incorporating these findings is proposed and discussed.
人α-1,3-岩藻糖基转移酶催化L-岩藻糖部分从二磷酸鸟苷-β-L-岩藻糖(GDP-Fuc)转移至受体糖,以形成具有生物学重要性的岩藻糖缀合物,包括唾液酸化路易斯x(SLex)。pH-速率曲线揭示了一个pKa为4.1的催化残基,这支持了一般碱机制。质子库存研究中表征的溶剂动力学同位素效应(Dv = 2.9,Dv/k = 2.1)表明,在导致过渡态形成的催化步骤中仅涉及单质子转移。在20℃下10 mM MnCl2存在时,L-岩藻糖从GDP-Fuc向水的羟基的非酶促转移从K(obs)= 3.5×10(-6)加速至3.8×10(-5) min-1,这支持了Mn2+作为亲电催化剂的证据。以GDP-Fuc水解作为非酶促速率,FucT V的酶促效率(Kcat/Ki,GDP-fuc. K(m),1.acNAc)/K(non)估计为1.2×10(10) M-1,过渡态亲和力为8.6×10(-11) M。Mn2+的Km测定为6.1 mM,替代二价金属辅因子鉴定为Ca2+、Co2+和Mg2+。受体糖特异性的详细动力学表征表明,在受体糖的还原端引入疏水官能团[例如-O-(CH2)5CO2CH3]可使K(m),受体大幅降低100倍以上。通过研究包括鸟苷系列在内的核苷酸的抑制作用来探究核苷酸的作用。抑制效力趋势(GTP≈GDP > GMP > >鸟苷)与GDP-Fuc对Mn2+的双齿螯合一致。探究了电荷和距离在GDP、氮杂糖和受体糖组合产生的协同抑制作用中的作用。提出并讨论了结合这些发现的岩藻糖基转移机制。