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通过定量方法研究mRNA翻译起始信号序列的强度:核苷酸取代对大鼠胰岛素原mRNA翻译效率的影响。

Strength of translation initiation signal sequence of mRNA as studied by quantification method: effect of nucleotide substitutions upon translation efficiency in rat preproinsulin mRNA.

作者信息

Iida Y, Masuda T

机构信息

Department of Chemistry, Graduate School of Science, Hokkaido University, Sapporo, Japan.

出版信息

Nucleic Acids Res. 1996 Sep 1;24(17):3313-6. doi: 10.1093/nar/24.17.3313.

DOI:10.1093/nar/24.17.3313
PMID:8811083
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC146100/
Abstract

Concerning the translation initiation signals in vertebrate mRNAs, both the ATG initiation codon and the sequences flanking the initiation codon are required to direct the position of initiation. A consensus sequence for the signal, (GCC)GCC(A or G)CCATGG, has been proposed, but actual initiation sequences differ from it to a greater or lesser degree. In the present report, the translation initiation signal sequences of rat preproinsulin and its mutant mRNAs were analyzed using a quantification method proposed previously. In this method, each 16 nt sequence in the mRNA was characterized by its sample score, which shows strength of the signal. So far, Kozak has constructed a number of preproinsulin mutant mRNAs in which nucleotides flanking the ATG codon are systematically varied, and measured the translation initiation efficiency in terms of the proinsulin product. Her experimental results were well understood on the basis of the strength of the translation initiation signal sequence.

摘要

关于脊椎动物mRNA中的翻译起始信号,ATG起始密码子及其侧翼序列对于指导起始位置都是必需的。已经提出了该信号的共有序列(GCC)GCC(A或G)CCATGG,但实际的起始序列与它或多或少存在差异。在本报告中,使用先前提出的定量方法分析了大鼠胰岛素原前体及其突变体mRNA的翻译起始信号序列。在该方法中,mRNA中的每个16个核苷酸的序列都由其样本得分来表征,该得分显示了信号强度。到目前为止,科扎克构建了许多胰岛素原前体突变体mRNA,其中ATG密码子侧翼的核苷酸被系统地改变,并根据胰岛素原产物测量了翻译起始效率。基于翻译起始信号序列的强度,她的实验结果得到了很好的理解。

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1
Strength of translation initiation signal sequence of mRNA as studied by quantification method: effect of nucleotide substitutions upon translation efficiency in rat preproinsulin mRNA.通过定量方法研究mRNA翻译起始信号序列的强度:核苷酸取代对大鼠胰岛素原mRNA翻译效率的影响。
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2
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Point mutations close to the AUG initiator codon affect the efficiency of translation of rat preproinsulin in vivo.靠近AUG起始密码子的点突变会影响大鼠胰岛素原在体内的翻译效率。
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本文引用的文献

1
Adherence to the first-AUG rule when a second AUG codon follows closely upon the first.当第二个AUG密码子紧跟在第一个之后时,对第一个AUG规则的遵循情况。
Proc Natl Acad Sci U S A. 1995 Mar 28;92(7):2662-6. doi: 10.1073/pnas.92.7.2662.
2
Eukaryotic ribosomes can recognize preproinsulin initiation codons irrespective of their position relative to the 5' end of mRNA.真核生物核糖体能够识别胰岛素原起始密码子,而不论其相对于mRNA 5'端的位置如何。
Nature. 1982 Sep 16;299(5880):221-6. doi: 10.1038/299221a0.
3
Point mutations close to the AUG initiator codon affect the efficiency of translation of rat preproinsulin in vivo.靠近AUG起始密码子的点突变会影响大鼠胰岛素原在体内的翻译效率。
Nature. 1984;308(5956):241-6. doi: 10.1038/308241a0.
4
Point mutations define a sequence flanking the AUG initiator codon that modulates translation by eukaryotic ribosomes.点突变确定了AUG起始密码子侧翼的一个序列,该序列可调节真核生物核糖体的翻译。
Cell. 1986 Jan 31;44(2):283-92. doi: 10.1016/0092-8674(86)90762-2.
5
DNA sequences and multivariate statistical analysis. Categorical discrimination approach to 5' splice site signals of mRNA precursors in higher eukaryotes' genes.DNA序列与多元统计分析。高等真核生物基因中mRNA前体5'剪接位点信号的分类判别方法。
Comput Appl Biosci. 1987 Jun;3(2):93-8. doi: 10.1093/bioinformatics/3.2.93.
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An analysis of 5'-noncoding sequences from 699 vertebrate messenger RNAs.对699种脊椎动物信使核糖核酸的5'-非编码序列的分析。
Nucleic Acids Res. 1987 Oct 26;15(20):8125-48. doi: 10.1093/nar/15.20.8125.
7
Quantification analysis of 5'-splice signal sequences in mRNA precursors. Mutations in rabbit beta-globin gene.mRNA前体中5'-剪接信号序列的定量分析。兔β-珠蛋白基因中的突变。
Biochim Biophys Acta. 1989 Apr 12;1007(3):270-6. doi: 10.1016/0167-4781(89)90147-4.
8
An analysis of vertebrate mRNA sequences: intimations of translational control.脊椎动物mRNA序列分析:翻译控制的暗示
J Cell Biol. 1991 Nov;115(4):887-903. doi: 10.1083/jcb.115.4.887.