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人纤连蛋白串联连接的III型模块的构象灵活性与结晶

Conformational flexibility and crystallization of tandemly linked type III modules of human fibronectin.

作者信息

Lombardo A, Wang Y, Ni C Z, Dai X, Dickinson C D, Kodandapani R, Chiang S, White C A, Pio F, Xuong N H, Hamlin R C, Ruoslahti E, Ely K R

机构信息

La Jolla Cancer Center, Burnham Institute, California 92037, USA.

出版信息

Protein Sci. 1996 Sep;5(9):1934-8. doi: 10.1002/pro.5560050922.

Abstract

Fibronectin is a large cell adhesion molecule that is composed of several functional domains. The cell-binding domain that binds to cell surface integrins consists of repeated homologous type III modules. In this study, recombinant fragments from the cell-binding domain of human fibronectin that participate in a newly characterized fibronectin-fibronectin interaction with FNIII1 were crystallized. In each case, the crystals had more than one fibronectin fragment in the asymmetric unit. Crystals of FNIII10-11 grew in the space group C2 with a = 117.1 A, b = 38.6 A, c = 80.6 A, beta = 97.2 degrees, and two molecules in the asymmetric unit. These crystals diffracted to 2.5 A resolution. Fragment FNIII8-11 and a shorter fragment, FNIII8-10, crystallized in hexagonal space groups with large unit cells and two to four molecules per asymmetric unit. Even very large crystals of these fragments did not diffract beyond 4 A. The crystal packing for this collection of fibronectin fragments suggests conformational flexibility between linked type III modules. The functional relevance of this flexibility for elongated versus compact models of the cell-binding domain of fibronectin is discussed.

摘要

纤连蛋白是一种由多个功能域组成的大型细胞黏附分子。与细胞表面整合素结合的细胞结合域由重复的同源III型模块组成。在本研究中,参与与FNIII1新鉴定的纤连蛋白-纤连蛋白相互作用的人纤连蛋白细胞结合域的重组片段被结晶。在每种情况下,晶体的不对称单元中都有不止一个纤连蛋白片段。FNIII10 - 11的晶体在空间群C2中生长,a = 117.1 Å,b = 38.6 Å,c = 80.6 Å,β = 97.2°,不对称单元中有两个分子。这些晶体的衍射分辨率达到2.5 Å。片段FNIII8 - 11和较短的片段FNIII8 - 10在具有大晶胞的六方空间群中结晶,每个不对称单元中有两到四个分子。即使是这些片段的非常大的晶体,其衍射也不超过4 Å。这组纤连蛋白片段的晶体堆积表明,连接的III型模块之间存在构象灵活性。讨论了这种灵活性对纤连蛋白细胞结合域的伸长型与紧凑型模型的功能相关性。

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本文引用的文献

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Protein Eng. 1995 Aug;8(8):823-7. doi: 10.1093/protein/8.8.823.
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