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金枪鱼铁细胞色素c的1H和13C超精细位移共振的归属

Assignment of 1H and 13C hyperfine-shifted resonances for tuna ferricytochrome c.

作者信息

Sukits S F, Satterlee J D

机构信息

Department of Chemistry, Washington State University, Pullman 99164-4630, USA.

出版信息

Biophys J. 1996 Nov;71(5):2848-56. doi: 10.1016/S0006-3495(96)79481-X.

Abstract

Tuna ferricytochrome c has been used to demonstrate the potential for completely assigning 1H and 13C strongly hyperfine-shifted resonances in metalloprotein paramagnetic centers. This was done by implementation of standard two-dimensional NMR experiments adapted to take advantage of the enhanced relaxation rates of strongly hyperfine-shifted nuclei. The results show that complete proton assignments of the heme and axial ligands can be achieved, and that assignments of several strongly shifted protons from amino acids located close to the heme can also be made. Virtually all proton-bearing heme 13C resonances have been located, and additional 13C resonances from heme vicinity amino acids are also identified. These results represent an improvement over previous proton resonance assignment efforts that were predicated on the knowledge of specific assignments in the diamagnetic protein and relied on magnetization transfer experiments in heterogeneous solutions composed of mixtures of diamagnetic ferrocytochrome c and paramagnetic ferricytochrome c. Even with that more complicated procedure, complete heme proton assignments for ferricytochrome c have never been demonstrated by a single laboratory. The results presented here were achieved using a more generally applicable strategy with a solution of the uniformly oxidized protein, thereby eliminating the requirement of fast electron self-exchange, which is a condition that is frequently not met.

摘要

金枪鱼铁细胞色素c已被用于证明在金属蛋白顺磁中心完全归属1H和13C强超精细位移共振的潜力。这是通过实施标准二维核磁共振实验来完成的,这些实验经过调整以利用强超精细位移核增强的弛豫速率。结果表明,可以实现血红素和轴向配体的完整质子归属,并且还可以对位于血红素附近的氨基酸的几个强位移质子进行归属。几乎所有含质子的血红素13C共振都已定位,并且还鉴定出血红素附近氨基酸的其他13C共振。这些结果相较于之前的质子共振归属工作有所改进,之前的工作基于抗磁性蛋白中特定归属的知识,并依赖于由抗磁性亚铁细胞色素c和顺磁性铁细胞色素c混合物组成的非均相溶液中的磁化转移实验。即便采用那个更复杂的程序,单个实验室也从未证明过铁细胞色素c的完整血红素质子归属。此处展示的结果是使用一种更普遍适用的策略,通过均匀氧化的蛋白质溶液获得的,从而消除了快速电子自交换的要求,而这一条件常常无法满足。

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本文引用的文献

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The solution structures of tuna and horse cytochromes c.
Eur J Biochem. 1980 Feb;103(3):533-41. doi: 10.1111/j.1432-1033.1980.tb05977.x.
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