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来自酒酒球菌的隐蔽质粒p4028的核苷酸序列。

Nucleotide sequence of plasmid p4028, a cryptic plasmid from Leuconostoc oenos.

作者信息

Zúñiga M, Pardo I, Ferrer S

机构信息

Facultat de Biologia, Department de Microbiologia, Universitat de València, Burjassot-Valencia, Spain.

出版信息

Plasmid. 1996 Jul;36(1):67-74. doi: 10.1006/plas.1996.0034.

Abstract

The Leuconostoc oenos plasmid p4028 was cloned in pBlueScript (SK+), and its complete nucleotide sequence was determined. The analysis of the nucleotide sequence revealed five open reading frames, all of them located on the same strand and grouped in two clusters separated by a short noncoding stretch. A similarity search against the other sequences deposited in the EMBL and GenBank databases showed that p4028 has no significant similarity with any of the sequences checked. Nevertheless, a putative ATP-binding motif was found in ORF2. A more detailed analysis of this ORF suggests that it could encode for a DNA-dependent ATPase.

摘要

酒类酒球菌(Leuconostoc oenos)质粒p4028被克隆到pBlueScript(SK+)中,并测定了其完整的核苷酸序列。核苷酸序列分析揭示了五个开放阅读框,它们均位于同一条链上,并聚为两个簇,中间由一段短的非编码序列隔开。对EMBL和GenBank数据库中所存其他序列进行的相似性搜索表明,p4028与所检查的任何序列均无显著相似性。然而,在开放阅读框2中发现了一个推定的ATP结合基序。对该开放阅读框进行更详细的分析表明,它可能编码一种依赖DNA的ATP酶。

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