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共响应分析:代谢控制分析的一种新实验策略。

Co-response analysis: a new experimental strategy for metabolic control analysis.

作者信息

Hofmeyr J H, Cornish-Bowden A

机构信息

Dept. of Biochemistry, University of Stellenbosch, South Africa.

出版信息

J Theor Biol. 1996 Oct 7;182(3):371-80. doi: 10.1006/jtbi.1996.0176.

Abstract

The formulation of the standard summation and connectivity relationships as a statement that the matrix of all the elasticities in a system is the inverse of the matrix of all the control coefficients is completely general, provided that only control coefficients for independent fluxes and concentrations are considered, and that the elasticity matrix is written to take account of the stoichiometry of the pathway and the implied dependences between concentrations. This generally implies that co-response analysis is also general, i.e. that all of the elasticities and all of the control coefficients in any system, regardless of branching, feedback effects, moiety conservation or other complications, can be determined by comparing the effects of perturbations of the enzyme activities on the steady-state fluxes and concentrations of the pathway. The approach requires no quantitative information about the magnitudes of the effects on the individual enzyme activities, and consequently no enzymes need to be studied in isolation from the pathway.

摘要

将标准求和与连通性关系表述为系统中所有弹性系数矩阵是所有控制系数矩阵的逆矩阵,这是完全通用的,前提是仅考虑独立通量和浓度的控制系数,并且弹性矩阵的写法要考虑途径的化学计量以及浓度之间隐含的依赖性。这通常意味着共响应分析也是通用的,即任何系统中的所有弹性系数和所有控制系数,无论是否存在分支、反馈效应、部分守恒或其他复杂情况,都可以通过比较酶活性扰动对途径稳态通量和浓度的影响来确定。该方法不需要关于对各个酶活性影响大小的定量信息,因此无需将酶从途径中分离出来进行研究。

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