Govindjee R, Imasheva E S, Misra S, Balashov S P, Ebrey T G, Chen N, Menick D R, Crouch R K
Center for Biophysics and Computational Biology, University of Illinois at Urbana-Champaign 61801, USA.
Biophys J. 1997 Feb;72(2 Pt 1):886-98. doi: 10.1016/s0006-3495(97)78723-x.
K129 is a residue located in the extracellular loop connecting transmembrane helices D and E of bacteriorhodopsin. Replacement of K129 with a histidine alters the pKa's of two key residues in the proton transport pathway, D85, and the proton release group (probably E204); the resulting pigment has properties that differ markedly from the wild type. 1) In the unphotolyzed state of the K129H mutant, the pKa of D85 is 5.1 +/- 0.1 in 150 mM KCl (compared to approximately 2.6 in the wild-type bacteriorhodopsin), whereas the unphotolyzed-state pKa of E204 decreases to 8.1 +/- 0.1 (from approximately 9.5 in the wild-type pigment). 2) The pKa of E204 in the M state is 7.0 +/- 0.1 in K129H, compared to approximately 5.8 in the wild-type pigment. 3) As a result of the change in the pKa of E204 in M, the order of light-induced proton release and uptake exhibits a dependence on pH in K129H differing from that of the wild type: at neutral pH and moderate salt concentrations (150 mM KCl), light-induced proton uptake precedes proton release, whereas it follows proton release at higher pH. This pumping behavior is similar to that seen in a related bacterial rhodopsin, archaerhodopsin-1, which has a histidine in the position analogous to K129. 4) At alkaline pH, a substantial fraction of all-trans K129H pigment (approximately 30%) undergoes a conversion into a shorter wavelength species, P480, with pKa approximately 8.1, close to the pKa of E204. 5) Guanidine hydrochloride lowers the pKa's of D85 and E204 in the ground state and the pKa of E204 in the M intermediate, and restores the normal order of proton release before uptake at neutral pH. 6) In the K129H mutant the coupling between D85 and E204 is weaker than in wild-type bacteriorhodopsin. In the unphotolyzed pigment, the change in the pKa's of either residue when the other changes its protonation state is only 1.5 units compared to 4.9 units in wild-type bacteriorhodopsin. In the M state of photolyzed K129H pigment, the corresponding change is 1 unit, compared to 3.7 units in the wild-type pigment. We suggest that K129 may be involved in stabilizing the hydrogen bonding network that couples E204 and D85. Substitution of K129 with a histidine residue causes structural changes that alter this coupling and affect the pKa's of E204 and D85.
K129是位于细菌视紫红质跨膜螺旋D和E之间细胞外环中的一个残基。用组氨酸取代K129会改变质子转运途径中两个关键残基D85和质子释放基团(可能是E204)的pKa值;产生的色素具有与野生型明显不同的特性。1)在K129H突变体的未光解状态下,在150 mM KCl中D85的pKa为5.1±0.1(相比之下野生型细菌视紫红质中约为2.6),而E204的未光解状态pKa降至8.1±0.1(从野生型色素中的约9.5)。2)在K129H中,M态下E204的pKa为7.0±0.1,而野生型色素中约为5.8。3)由于M态下E204的pKa发生变化,K129H中光诱导的质子释放和摄取顺序对pH的依赖性与野生型不同:在中性pH和中等盐浓度(150 mM KCl)下,光诱导的质子摄取先于质子释放,而在较高pH下则跟随质子释放。这种泵浦行为类似于在相关细菌视紫红质古细菌视紫红质-1中观察到的行为(其在与K129类似的位置有一个组氨酸)。4)在碱性pH下,相当一部分全反式K129H色素(约30%)会转化为波长更短物种P480,其pKa约为8.1,接近E204的pKa。5)盐酸胍会降低基态下D85和E204的pKa以及M中间体中E204的pKa,并在中性pH下恢复质子摄取前正常的质子释放顺序。6)在K129H突变体中,D85和E204之间的偶联比野生型细菌视紫红质中的弱。在未光解的色素中,当另一个残基改变其质子化状态时,任一残基pKa的变化仅为1.5个单位,而野生型细菌视紫红质中为4.9个单位。在光解的K129H色素的M态下,相应的变化为1个单位,而野生型色素中为3.7个单位。我们认为K129可能参与稳定连接E204和D85的氢键网络。用组氨酸残基取代K129会导致结构变化,从而改变这种偶联并影响E204和D85的pKa。