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本文引用的文献

1
Contributions to conformational entropy arising from bond vector fluctuations measured from NMR-derived order parameters: application to protein folding.通过核磁共振衍生的序参量测量的键向量涨落对构象熵的贡献:在蛋白质折叠中的应用
J Mol Biol. 1996 Oct 25;263(2):369-82. doi: 10.1006/jmbi.1996.0581.
2
Local mobility within villin 14T probed via heteronuclear relaxation measurements and a reduced spectral density mapping.通过异核弛豫测量和降低的谱密度映射探究肌动蛋白结合蛋白14T内的局部流动性。
Biochemistry. 1996 Feb 13;35(6):1722-32. doi: 10.1021/bi951933o.
3
Internal mobility in the partially folded DNA binding and dimerization domains of GAL4: NMR analysis of the N-H spectral density functions.GAL4部分折叠的DNA结合和二聚化结构域中的内部流动性:N-H光谱密度函数的核磁共振分析
Biochemistry. 1996 Feb 27;35(8):2674-86. doi: 10.1021/bi9526802.
4
Spectral density function mapping using 15N relaxation data exclusively.仅使用15N弛豫数据的谱密度函数映射。
J Biomol NMR. 1995 Sep;6(2):153-62. doi: 10.1007/BF00211779.
5
Frequency spectrum of NH bonds in eglin c from spectral density mapping at multiple fields.通过多场谱密度映射得到的埃格林C中NH键的频谱。
Biochemistry. 1995 Dec 26;34(51):16733-52. doi: 10.1021/bi00051a023.
6
Effects of ion binding on the backbone dynamics of calbindin D9k determined by 15N NMR relaxation.通过15N核磁共振弛豫测定离子结合对钙结合蛋白D9k主链动力学的影响。
Biochemistry. 1993 Sep 21;32(37):9832-44. doi: 10.1021/bi00088a039.
7
Characterization of the extent of internal motions in oligosaccharides.寡糖内部运动程度的表征
Biochemistry. 1993 Nov 30;32(47):12715-24. doi: 10.1021/bi00210a021.
8
Many of the immunoglobulin superfamily domains in cell adhesion molecules and surface receptors belong to a new structural set which is close to that containing variable domains.细胞黏附分子和表面受体中的许多免疫球蛋白超家族结构域属于一个新的结构组,该结构组与包含可变结构域的结构组相近。
J Mol Biol. 1994 May 13;238(4):528-39. doi: 10.1006/jmbi.1994.1312.
9
1H resonance assignments and secondary structure of the 13.6 kDa glycosylated adhesion domain of human CD2.人CD2的13.6 kDa糖基化粘附结构域的1H共振归属及二级结构
Biochemistry. 1993 Oct 19;32(41):10995-1006. doi: 10.1021/bi00092a008.
10
Crystal structure of the extracellular region of the human cell adhesion molecule CD2 at 2.5 A resolution.人细胞黏附分子CD2胞外区域在2.5埃分辨率下的晶体结构。
Structure. 1994 Aug 15;2(8):755-66. doi: 10.1016/s0969-2126(94)00076-x.

人类CD2的反受体结合位点呈现出一个扩展的表面区域,其具有多种构象,以毫秒到微秒的运动频率波动。

The counterreceptor binding site of human CD2 exhibits an extended surface patch with multiple conformations fluctuating with millisecond to microsecond motions.

作者信息

Wyss D F, Dayie K T, Wagner G

机构信息

Procept Inc., Cambridge, Massachusetts 02139, USA.

出版信息

Protein Sci. 1997 Mar;6(3):534-42. doi: 10.1002/pro.5560060303.

DOI:10.1002/pro.5560060303
PMID:9070436
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2143668/
Abstract

We have used 15N NMR relaxation experiments to probe, for the glycosylated human CD2 adhesion domain, the overall molecular motion, as well as very fast nanosecond-picosecond (ns-ps) and slow millisecond-microsecond (ms-microsecond) internal motions. Using a novel analysis method that considers all residues, we obtained a correlation time for the overall motion of 9.5 +/- 0.3 ns. Surprisingly, we found a large contiguous patch of residues in the counterreceptor (CD58) binding site of human CD2 exhibiting slow conformational exchange motions (ms-microsecond). On the other hand, almost none of the residues of the CD58 binding side display fast (ns-ps) internal motions of amplitudes larger than what is seen for well-ordered regions of the structure. Residues close to the N-glycosylation site, and the first N-acetylglucosamine of the high mannose glycan are as rigid as the protein core. Residues conserved in the immunoglobulin superfamily V-set domain are generally very rigid.

摘要

我们使用了¹⁵N NMR弛豫实验来探究糖基化人CD2黏附结构域的整体分子运动,以及极快的纳秒至皮秒(ns - ps)和较慢的毫秒至微秒(ms - 微秒)内部运动。通过使用一种考虑所有残基的新型分析方法,我们获得了整体运动的相关时间为9.5±0.3纳秒。令人惊讶的是,我们发现在人CD2的反受体(CD58)结合位点存在一大片连续的残基,呈现出缓慢的构象交换运动(毫秒至微秒)。另一方面,CD58结合侧几乎没有残基表现出比结构有序区域更大幅度的快速(纳秒至皮秒)内部运动。靠近N - 糖基化位点的残基以及高甘露糖聚糖的第一个N - 乙酰葡糖胺与蛋白质核心一样刚性。免疫球蛋白超家族V - 集结构域中保守的残基通常非常刚性。