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鼠类啮齿动物内含子和外显子的比较进化速率

Comparative evolutionary rates of introns and exons in murine rodents.

作者信息

Hughes A L, Yeager M

机构信息

Department of Biology and Institute of Molecular Evolutionary Genetics, The Pennsylvania State University, University Park, PA 16802, USA.

出版信息

J Mol Evol. 1997 Aug;45(2):125-30. doi: 10.1007/pl00006211.

Abstract

Analysis of DNA sequences of 132 introns and 140 exons from 42 pairs of orthologous genes of mouse and rat was used to compare patterns of evolutionary change between introns and exons. The mean of the absolute difference in length (measured in base pairs) between the two species was nearly five times as high in the case of introns as in the case of exons. The average rate of nucleotide substitution in introns was very similar to the rate of synonymous substitution in exons, and both were about three times the rate of substitution at nonsynonymous sites in exons. G+C content of introns and exons of the same gene were correlated; but mean G+C content at the third positions of exons was significantly higher than that of introns or positions 1-2 of exons from the same gene. G+C content was conserved over evolutionary time, as indicated by strong correlations between mouse and rat; but the change in G+C content was greatest at position 3 of exons, intermediate in introns, and lowest at positions 1-2 in introns.

摘要

对来自小鼠和大鼠42对直系同源基因的132个内含子和140个外显子的DNA序列进行分析,以比较内含子和外显子之间的进化变化模式。在这两个物种之间,内含子长度绝对差异(以碱基对衡量)的平均值几乎是外显子的五倍。内含子中的核苷酸替换平均速率与外显子中的同义替换速率非常相似,并且两者都约为外显子中非同义位点替换速率的三倍。同一基因的内含子和外显子的G+C含量是相关的;但外显子第三位的平均G+C含量明显高于同一基因的内含子或外显子第一至二位的G+C含量。正如小鼠和大鼠之间的强相关性所示,G+C含量在进化过程中是保守的;但G+C含量的变化在外显子第三位最大,在内含子中居中,在内含子第一至二位最小。

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