Aguilar C F, Sanderson I, Moracci M, Ciaramella M, Nucci R, Rossi M, Pearl L H
Department of Biochemistry and Molecular Biology, Univesity College London, Gower Street, London, WC1E 6BT, UK.
J Mol Biol. 1997 Sep 5;271(5):789-802. doi: 10.1006/jmbi.1997.1215.
Enzymes from hyperthermophilic organisms must operate at temperatures which rapidly denature proteins from mesophiles. The structural basis of this thermostability is still poorly understood. Towards a further understanding of hyperthermostability, we have determined the crystal structure of the beta-glycosidase (clan GH-1A, family 1) from the hyperthermophilic archaeon Sulfolobus solfataricus at 2.6 A resolution. The enzyme is a tetramer with subunit molecular mass at 60 kDa, and crystallises with half of the tetramer in the asymmetric unit. The structure is a (betaalpha)8 barrel, but with substantial elaborations between the beta-strands and alpha-helices in each repeat. The active site occurs at the centre of the top face of the barrel and is connected to the surface by a radial channel which becomes a blind-ended tunnel in the tetramer, and probably acts as the binding site for extended oligosaccharide substrates. Analysis of the structure reveals two features which differ significantly from mesophile proteins; (1) an unusually large proportion of surface ion-pairs involved in networks that cross-link sequentially separate structures on the protein surface, and (2) an unusually large number of solvent molecules buried in hydrophilic cavities between sequentially separate structures in the protein core. These factors suggest a model for hyperthermostability via resilience rather than rigidity.
嗜热生物的酶必须在能迅速使嗜温生物的蛋白质变性的温度下发挥作用。这种热稳定性的结构基础仍知之甚少。为了进一步了解超嗜热稳定性,我们已确定了嗜热古菌嗜热栖热菌(Sulfolobus solfataricus)的β-糖苷酶(糖苷水解酶家族1,GH-1A族)在2.6埃分辨率下的晶体结构。该酶是一种四聚体,亚基分子量为60 kDa,在不对称单元中以四聚体的一半结晶。其结构为(βα)8桶状结构,但在每个重复单元的β链和α螺旋之间有大量的精细结构。活性位点位于桶状结构顶面的中心,并通过一条径向通道与表面相连,该通道在四聚体中成为一个盲端隧道,可能作为延伸寡糖底物的结合位点。对该结构的分析揭示了两个与嗜温生物蛋白质显著不同的特征:(1)参与交联蛋白质表面顺序分离结构的网络中的表面离子对比例异常大;(2)埋在蛋白质核心中顺序分离结构之间亲水腔中的溶剂分子数量异常多。这些因素提示了一种通过弹性而非刚性实现超嗜热稳定性的模型。