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用于区分具有离散分布的假设的贝叶斯程序:四倍体落新妇的遗传

Bayesian procedures for discriminating among hypotheses with discrete distributions: inheritance in the tetraploid Astilbe biternata.

作者信息

Olson M S

机构信息

Botany Department, Duke University, Durham, North Carolina 27708-0339, USA.

出版信息

Genetics. 1997 Dec;147(4):1933-42. doi: 10.1093/genetics/147.4.1933.

Abstract

Discrimination between disomic and tetrasomic inheritance aids in determining whether tetraploids originated by allotetraploidy or autotetraploidy, respectively. Past assessments of inheritance in tetraploids have used analyses whereby each inheritance hypothesis is tested independently. I present a Bayesian analysis that is appropriate for discriminating among several inheritance hypotheses and can be used in any case where hypotheses are defined by discrete distributions. The Bayesian approach incorporates prior knowledge of the probability of occurrence of disomic and tetrasomic hypotheses so that the results of the analysis are not biased by the fact that there is a single tetrasomic hypothesis and multiple disomic hypotheses. This analysis is used to interpret data from crosses in the tetraploid Astilbe biternata, a herbaceous plant native to the southern Appalachians. The progeny ratios from all crosses favored the hypothesis of disomic inheritance at both the PGM and slow-PGI loci. These results support earlier cytogenetic evidence for the allotetraploid origin of Astilbe biternata.

摘要

二体遗传和四体遗传之间的区分有助于确定四倍体分别是通过异源四倍体化还是同源四倍体化产生的。过去对四倍体遗传的评估采用的分析方法是,对每个遗传假设进行独立检验。我提出了一种贝叶斯分析方法,适用于区分多个遗传假设,并且可用于由离散分布定义假设的任何情况。贝叶斯方法纳入了二体和四体假设发生概率的先验知识,因此分析结果不会因存在单个四体假设和多个二体假设这一事实而产生偏差。该分析用于解释来自四倍体落新妇(一种原产于阿巴拉契亚山脉南部的草本植物)杂交的数据。所有杂交的子代比例在磷酸葡萄糖变位酶(PGM)和慢磷酸葡萄糖异构酶(slow-PGI)位点均支持二体遗传假设。这些结果支持了落新妇异源四倍体起源的早期细胞遗传学证据。

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