Miles C S, Lederer F, Lê K H
Laboratoire d'Enzymologie et Biochimie Structurales, Centre National de la Recherche Scientifique, Gif-sur-Yvette, France.
Biochemistry. 1998 Mar 10;37(10):3440-8. doi: 10.1021/bi972639u.
Flavocytochrome b2 or L-lactate dehydrogenase from yeast is a tetrameric enzyme which oxidizes lactate at the expense of cytochrome c or artificial electron acceptors. The prosthetic group FMN is reduced by the substrate and then transfers sequentially the reducing equivalents to heme b2 in the same subunit. The latter is reoxidized by cytochrome c. The crystal structure of the enzyme indicates that each subunit is composed of a flavodehydrogenase domain (FDH) and a cytochrome b2 domain; the latter, which encompasses the first 99 residues of the peptide chain, is mobile relative to the tetrameric FDH assembly. We describe here the properties of a monoclonal antibody elicited against the holoenzyme. It only recognizes the heme-binding domain, with a Kd lower than 10(-7) M, and its epitope is conformational. In the enzyme-IgG complex, flavin is reduced normally and can be reoxidized by ferricyanide, but no longer by heme b2. Stopped-flow experiments in the absence of electron acceptors give no indication of flavin to heme electron transfer in the enzyme-antibody complex. In other words, the two domains are functionally uncoupled. The binding stoichiometry is 1/1 for the Fab fragment with respect to the isolated, monomeric, heme-binding domain, but 2/4 with respect to the enzyme tetramer; furthermore, binding of two Fab fragments per tetramer is sufficient to cause inhibition of intra-subunit flavin to heme electron transfer in all four subunits. Altogether these results can only be rationalized by considering that mobility of the cytochrome domain with respect to the FDH is an essential component of the catalytic cycle. The first experiment designed to locate the epitope shows it does not encompass the interdomain peptide linker (so-called hinge region, centered on residues 99-100).
酵母中的黄素细胞色素b2或L-乳酸脱氢酶是一种四聚体酶,它以细胞色素c或人工电子受体为代价氧化乳酸。辅基FMN被底物还原,然后依次将还原当量转移到同一亚基中的血红素b2上。后者被细胞色素c再氧化。该酶的晶体结构表明,每个亚基由一个黄素脱氢酶结构域(FDH)和一个细胞色素b2结构域组成;后者包含肽链的前99个残基,相对于四聚体FDH组装体是可移动的。我们在此描述针对全酶产生的单克隆抗体的特性。它只识别血红素结合结构域,解离常数低于10^(-7) M,其表位是构象性的。在酶-IgG复合物中,黄素正常还原,可被铁氰化物再氧化,但不再被血红素b2再氧化。在没有电子受体的情况下进行的停流实验没有表明在酶-抗体复合物中有黄素向血红素的电子转移。换句话说,这两个结构域在功能上是解偶联的。Fab片段与分离的单体血红素结合结构域的结合化学计量比为1/1,但与酶四聚体的结合化学计量比为2/4;此外,每个四聚体结合两个Fab片段足以抑制所有四个亚基中亚基内黄素向血红素的电子转移。总体而言,只有考虑到细胞色素结构域相对于FDH的移动性是催化循环的一个重要组成部分,这些结果才能得到合理的解释。第一个定位表位的实验表明它不包括结构域间肽接头(所谓的铰链区,以99-100位残基为中心)。