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多杀性巴氏杆菌的转座子Tn916插入诱变及破坏位点的直接测序

Transposon Tn916 insertional mutagenesis of Pasteurella multocida and direct sequencing of disruption site.

作者信息

DeAngelis P L

机构信息

Department of Biochemistry and Molecular Biology, University of Oklahoma Health Sciences Center, 940 Stanton L. Young Blvd., Oklahoma City, OK, 73104, USA.

出版信息

Microb Pathog. 1998 Apr;24(4):203-9. doi: 10.1006/mpat.1997.0189.

Abstract

The transposon Tn916, when introduced into Pasteurella multocida by electroporation on a nonreplicating plasmid, integrates into the bacterial chromosome. Efficiencies of approximately 8x10(4) mutants/microg of plasmid DNA were obtained. Restriction digestion and Southern analysis indicate that the Tn916 element integrates in a quasi-random fashion throughout the genome. Most transformants had a single copy of the transposon but approximately 5% had two copies. Furthermore, the nucleotide sequence at the disruption site of any desired mutant was obtained by capitalizing on the differential sensitivity of the transposon and the genome to the restriction enzyme HhaI; molecular cloning or amplification by polymerase chain reaction was not required. The Tn916 element has a single HhaI site. On the other hand, this restriction enzyme frequently cleaves the P. multocida chromosome with the vast majority of the resulting genomic fragments being less than 7 kb in length. Tn916 integration adds a 12 kb segment to the genomic HhaI fragment at the site of disruption. The resulting chimeric DNA fragment was isolated on the basis of size from digests of mutant genomic DNA separated on agarose gels. DNA sequencing with primers corresponding to the terminus of the Tn916 element was used to determine the sequence at the disruption site. In summary, Tn916 can be used to disrupt and to clone genes of P. multocida in a rapid and facile fashion.

摘要

将转座子Tn916通过电穿孔导入多杀性巴氏杆菌,使其携带在非复制性质粒上,该转座子可整合到细菌染色体中。每微克质粒DNA可获得约8×10⁴个突变体。限制性酶切和Southern分析表明,Tn916元件以准随机方式整合到整个基因组中。大多数转化体含有转座子的单拷贝,但约5%含有两个拷贝。此外,利用转座子和基因组对限制性内切酶HhaI的不同敏感性,可获得任何所需突变体破坏位点处的核苷酸序列,无需分子克隆或聚合酶链反应扩增。Tn916元件有一个单一的HhaI位点。另一方面,这种限制性内切酶经常切割多杀性巴氏杆菌染色体,产生的绝大多数基因组片段长度小于7kb。Tn916整合会在破坏位点处的基因组HhaI片段上添加一个12kb的片段。根据大小从琼脂糖凝胶上分离的突变体基因组DNA消化物中分离出所得的嵌合DNA片段。使用与Tn916元件末端对应的引物进行DNA测序,以确定破坏位点处的序列。总之,Tn916可用于快速简便地破坏和克隆多杀性巴氏杆菌的基因。

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