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以表型特征和PCR扩增的16S rDNA限制性分析为特征的植物相关链球菌的异质性

Heterogeneity of plant-associated streptococci as characterized by phenotypic features and restriction analysis of PCR-amplified 16S rDNA.

作者信息

Ulrich A, Müller T

机构信息

Centre for Agricultural Landscape and Land Use Research Müncheberg, Institute of Microbial Ecology and Soil Biology, Germany.

出版信息

J Appl Microbiol. 1998 Feb;84(2):293-303. doi: 10.1046/j.1365-2672.1998.00343.x.

Abstract

Thirty-five strains of streptococci isolated from forage grasses were examined by restriction analysis of PCR-amplified 16S rDNA. Using a set of seven endonucleases, five 16S rDNA genotypes were obtained. The isolates could be identified as belonging to the species Enterococcus faecium, Ent. mundtii, Ent. faecalis, Ent. casseliflavus and Lactococcus lactis ssp. lactis, respectively. To assign the isolates to one of these species, digestion with the endonuclease HinfI was sufficient. Data obtained from whole-cell protein analysis were in accordance with the species identification. Additionally, three of the five species found were subdivided into two related subgroups. Both methods are suitable for a rapid and unequivocal identification of plant-associated streptococci. The phenotypic characters showed a high diversity and were in some cases contrary to the expected features usually given in genus and species descriptions. The results demonstrated the close relatedness of the determined species in contrast to their high phenotypic heterogeneity.

摘要

对从牧草中分离出的35株链球菌进行了PCR扩增16S rDNA的限制性分析。使用一组七种核酸内切酶,获得了五种16S rDNA基因型。这些分离株可分别鉴定为属于粪肠球菌、蒙氏肠球菌、屎肠球菌、卡氏黄色肠球菌和乳酸乳球菌乳酸亚种。为了将这些分离株归为这些物种之一,用核酸内切酶HinfI进行消化就足够了。从全细胞蛋白质分析获得的数据与物种鉴定结果一致。此外,发现的五个物种中的三个被细分为两个相关的亚组。这两种方法都适用于快速明确地鉴定与植物相关的链球菌。表型特征表现出高度的多样性,在某些情况下与属和种描述中通常给出的预期特征相反。结果表明,所确定的物种之间亲缘关系密切,但其表型异质性很高。

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