Lebbink J H, Knapp S, van der Oost J, Rice D, Ladenstein R, de Vos W M
Laboratory for Microbiology, Wageningen Agricultural University, Hesselink van Suchtelenweg 4, Wageningen, NL-6703 CT, The Netherlands.
J Mol Biol. 1998 Jul 10;280(2):287-96. doi: 10.1006/jmbi.1998.1870.
Comparison of the recently determined three-dimensional structures of several glutamate dehydrogenases allowed for the identification of a five-residue ion-pair network in the hinge region of Pyrococcus furiosus glutamate dehydrogenase (melting temperature 113 degrees C), that is not present in the homologous glutamate dehydrogenase from Thermotoga maritima (melting temperature 93 degrees C). In order to study the role of this ion-pair network, we introduced it into the T. maritima enzyme using a site-directed mutagenesis approach. The resulting T. maritima glutamate dehydrogenases N97D, G376 K and N97D/G376 K as well as the wild-type enzyme were overproduced in Escherichia coli and subsequently purified. Elucidation of the three-dimensional structure of the double mutant N97D/G376 K at 3.0 A, showed that the designed ion-pair interactions were indeed formed. Moreover, because of interactions with an additional charged residue, a six-residue network is present in this double mutant. Melting temperatures of the mutant enzymes N97D, G376 K and N97D/G376 K, as determined by differential scanning calorimetry, did not differ significantly from that of the wild-type enzyme. Identical transition midpoints in guanidinium chloride-induced denaturation experiments were found for the wild-type and all mutant enzymes. Thermal inactivation at 85 degrees C occured more than twofold faster for all mutant enzymes than for the wild-type glutamate dehydrogenase. At temperatures of 65 degrees C and higher, the wild-type and the three mutant enzymes showed identical specific activities. However, at 58 degrees C the specific activity of N97D/G376 K and G376 K was found to be significantly higher than that of the wild-type and N97D enzymes. These results suggest that the engineered ion-pair interactions in the hinge region do not affect the stability towards temperature or guanidinium chloride-induced denaturation but rather affect the specific activity of the enzyme and the temperature at which it functions optimally.
通过比较最近测定的几种谷氨酸脱氢酶的三维结构,得以在嗜热栖热菌谷氨酸脱氢酶(熔点113摄氏度)的铰链区鉴定出一个由五个残基组成的离子对网络,而在来自嗜热栖热菌(熔点93摄氏度)的同源谷氨酸脱氢酶中不存在该网络。为了研究这个离子对网络的作用,我们使用定点诱变方法将其引入嗜热栖热菌的酶中。所得的嗜热栖热菌谷氨酸脱氢酶N97D、G376K和N97D/G376K以及野生型酶在大肠杆菌中过量表达,随后进行纯化。对双突变体N97D/G376K在3.0埃分辨率下的三维结构解析表明,确实形成了设计的离子对相互作用。此外,由于与另一个带电荷残基的相互作用,该双突变体中存在一个由六个残基组成的网络。通过差示扫描量热法测定,突变酶N97D、G376K和N97D/G376K的熔点与野生型酶的熔点没有显著差异。在氯化胍诱导的变性实验中,野生型和所有突变酶的转变中点相同。在85摄氏度下,所有突变酶的热失活速度比野生型谷氨酸脱氢酶快两倍以上。在65摄氏度及更高温度下,野生型和三种突变酶表现出相同的比活性。然而,在58摄氏度时,发现N97D/G376K和G376K的比活性明显高于野生型和N97D酶。这些结果表明,铰链区工程化的离子对相互作用不影响对温度或氯化胍诱导变性的稳定性,而是影响酶的比活性及其最佳功能温度。