Dhandayuthapani S, Rasmussen W G, Baseman J B
Department of Microbiology, The University of Texas Health Science Center at San Antonio, 7703 Floyd Curl Dr., San Antonio, TX 78284, USA.
Gene. 1998 Jul 17;215(1):213-22. doi: 10.1016/s0378-1119(98)00260-1.
A promoter probe vector, pGFPUV2, with Green Fluorescent Protein (GFP) as the reporter system was constructed to identify potential mycoplasmal promoter-containing regulatory sequences in E. coli. Libraries of M. pneumoniae and M. genitalium DNA constructed in pGFPUV2 and transformed into E. coli resulted in GFP-expressing clones. Primer extension analysis with E. coli RNA from five M. pneumoniae clones and two M. genitalium clones indicated that transcription originated from the insert DNA fragments of these promoter constructs. Primers based on the insert DNA sequences were used in primer extension reactions with total RNA isolated from M. pneumoniae or M. genitalium. Of the seven primers used, three generated products by primer extension with mycoplasmal RNA. However, only one of the DNAs had a 5' end similar to that obtained in a comparable reaction with E. coli RNA, and the start site of this transcript appeared to originate one base prior to the predicted open reading frame. These results indicate that E. coli can identify mycoplasmal promoters which have transcriptional elements resembling E. coli promoters.
构建了一种以绿色荧光蛋白(GFP)作为报告系统的启动子探针载体pGFPUV2,用于在大肠杆菌中鉴定潜在的含支原体启动子的调控序列。肺炎支原体和生殖支原体DNA文库构建于pGFPUV2中并转化到大肠杆菌中,得到了表达GFP的克隆。对来自五个肺炎支原体克隆和两个生殖支原体克隆的大肠杆菌RNA进行引物延伸分析表明转录起始于这些启动子构建体的插入DNA片段。基于插入DNA序列的引物用于对从肺炎支原体或生殖支原体中分离的总RNA进行引物延伸反应。在使用的七个引物中,三个通过与支原体RNA进行引物延伸产生了产物。然而,只有一个DNA具有与在与大肠杆菌RNA的类似反应中获得的5'端相似的末端,并且该转录本的起始位点似乎在预测的开放阅读框之前一个碱基处起始。这些结果表明大肠杆菌能够鉴定出具有类似于大肠杆菌启动子转录元件的支原体启动子。