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金黄色葡萄球菌金属蛋白酶的氨基酸序列及分辨率为1.72埃的三维结构

Amino-acid sequence and three-dimensional structure of the Staphylococcus aureus metalloproteinase at 1.72 A resolution.

作者信息

Banbula A, Potempa J, Travis J, Fernandez-Catalán C, Mann K, Huber R, Bode W, Medrano F

机构信息

Jagiellonian University Institute of Molecular Biology Al. Mickiewicza 3, 31-120, Krakow, Poland.

出版信息

Structure. 1998 Sep 15;6(9):1185-93. doi: 10.1016/s0969-2126(98)00118-x.

Abstract

BACKGROUND

Aureolysin is an extracellular zinc-dependent metalloproteinase from the pathogenic bacterium Staphylococcus aureus. This enzyme exhibits in vitro activity against several molecules of biological significance for the host, indicating that it is involved in the pathology of staphylococcal diseases.

RESULTS

Here we report the amino-acid sequence and inhibitor-free X-ray crystal structure of aureolysin, a member of the thermolysin family of zinc-dependent metalloproteinases. This enzyme, which binds one zinc and three calcium ions, comprises a single chain of 301 amino acids that consists of a beta-strand-rich upper domain and an alpha-helix-rich lower domain.

CONCLUSIONS

The overall structure of aureolysin is very similar to that of the other three members of this family whose structures are known - thermolysin (TLN) from Bacillus thermoproteolyticus, neutral protease (NP) from Bacillus cereus and elastase (PAE) from Pseudomonas aeruginosa. But an important difference has been encountered: in contrast to what has been observed in the other three members of this family (TLN, NP and PAE), inhibitor-free aureolysin displays a 'closed' active site cleft conformation. This new structure therefore raises questions about the universality of the hinge-bending motion model for the neutral metalloproteinases.

摘要

背景

金黄色葡萄球菌溶素是一种来自致病性细菌金黄色葡萄球菌的细胞外锌依赖性金属蛋白酶。该酶在体外对宿主的几种具有生物学意义的分子具有活性,表明它参与了葡萄球菌疾病的病理过程。

结果

在此我们报告了金黄色葡萄球菌溶素(一种锌依赖性金属蛋白酶嗜热菌蛋白酶家族的成员)的氨基酸序列和无抑制剂的X射线晶体结构。这种酶结合一个锌离子和三个钙离子,由一条301个氨基酸的单链组成,该单链由富含β链的上部结构域和富含α螺旋的下部结构域组成。

结论

金黄色葡萄球菌溶素的整体结构与该家族已知结构的其他三个成员非常相似——来自嗜热栖热放线菌的嗜热菌蛋白酶(TLN)、来自蜡状芽孢杆菌的中性蛋白酶(NP)和来自铜绿假单胞菌的弹性蛋白酶(PAE)。但发现了一个重要差异:与该家族的其他三个成员(TLN、NP和PAE)中观察到的情况不同,无抑制剂的金黄色葡萄球菌溶素呈现出“封闭”的活性位点裂隙构象。因此,这种新结构对中性金属蛋白酶的铰链弯曲运动模型的普遍性提出了疑问。

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