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新城疫病毒博德特C株的尾部、核衣壳蛋白基因及基因间隔区的核苷酸序列以及全基因组序列的完成

Nucleotide sequences of the trailer, nucleocapsid protein gene and intergenic regions of Newcastle disease virus strain Beaudette C and completion of the entire genome sequence.

作者信息

Krishnamurthy S, Samal S K

机构信息

Virginia-Maryland Regional College of Veterinary Medicine, University of Maryland, College Park 20742, USA.

出版信息

J Gen Virol. 1998 Oct;79 ( Pt 10):2419-24. doi: 10.1099/0022-1317-79-10-2419.

DOI:10.1099/0022-1317-79-10-2419
PMID:9780047
Abstract

The nucleotide sequences of the nucleocapsid protein (NP) gene, the intergenic regions in the nucleocapsid protein (NP)-phosphoprotein (P), P-matrix protein (M) and M-fusion glycoprotein gene junctions and the trailer region of a virulent Newcastle disease virus (NDV) strain Beaudette C were determined. The NP gene is 1747 nt long and encodes a protein of 489 amino acids. Each of the intergenic sequences determined is 1 nt long and, including the previously published intergenic sequences, the gene junction sequences varied in length from 1-47 nt and lacked any sequence identity. The 5' trailer region is 113 nt in length. Comparison of the sequences of the terminal leader and trailer regions of Beaudette C strain with those of nonvirulent strain B1 showed a high level of conservation, indicating the likelihood of these elements not being a factor in virulence. Together with previously published data, this report completes the sequence of the 15,186 nt genomic RNA of NDV strain Beaudette C.

摘要

测定了一株强毒新城疫病毒(NDV)Beaudette C株核衣壳蛋白(NP)基因、核衣壳蛋白(NP)-磷蛋白(P)、P-基质蛋白(M)和M-融合糖蛋白基因连接处的基因间隔区以及拖尾区的核苷酸序列。NP基因长1747个核苷酸,编码一个由489个氨基酸组成的蛋白质。所测定的每个基因间隔序列长1个核苷酸,并且包括先前发表的基因间隔序列在内,基因连接序列长度从1至47个核苷酸不等,且不存在任何序列同一性。5′拖尾区长113个核苷酸。将Beaudette C株的末端前导区和拖尾区序列与无毒力的B1株的相应序列进行比较,结果显示高度保守,表明这些元件不太可能是毒力的决定因素。结合先前发表的数据,本报告完成了NDV Beaudette C株15,186个核苷酸的基因组RNA序列测定。

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