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物种形成持续时间及更新世对脊椎动物系统地理学的影响。

Speciation durations and Pleistocene effects on vertebrate phylogeography.

作者信息

Avise J C, Walker D, Johns G C

机构信息

Department of Genetics, University of Georgia, Athens 30602-7223, USA.

出版信息

Proc Biol Sci. 1998 Sep 22;265(1407):1707-12. doi: 10.1098/rspb.1998.0492.

DOI:10.1098/rspb.1998.0492
PMID:9787467
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1689361/
Abstract

An approach applied previously to avian biotas is extended in this paper to other vertebrate classes to evaluate Pleistocene phylogeographic effects and to estimate temporal spans of the speciation process (speciation durations) from mitochondrial (mt) DNA data on extant taxa. Provisional molecular clocks are used to date population separations and to bracket estimates of speciation durations between minimum and maximum values inferred from genetic distances between, respectively, extant pairs of intraspecific phylogroups and sister species. Comparisons of genetic-distance trends across the vertebrate classes reveal the following: (i) speciation durations normally entail at least two million years on average; (ii) for mammals and birds, Pleistocene conditions played an important role in initiating phylogeographic differentiation among now-extant conspecific populations as well as in further sculpting pre-existing phylogeographic variety into many of today's sister species; and (iii) for herpetofauna and fishes, inferred Pleistocene biogeographic influences on present-day taxa differ depending on alternative but currently plausible mtDNA rate calibrations.

摘要

本文将先前应用于鸟类生物群的一种方法扩展到其他脊椎动物类群,以评估更新世系统发育地理学效应,并根据现存分类群的线粒体(mt)DNA数据估计物种形成过程的时间跨度(物种形成持续时间)。临时分子钟用于确定种群分离的时间,并确定从现存种内系统发育群对和姊妹物种之间的遗传距离推断出的物种形成持续时间估计值的最小值和最大值范围。对各脊椎动物类群遗传距离趋势的比较揭示了以下几点:(i)物种形成持续时间平均通常至少需要200万年;(ii)对于哺乳动物和鸟类,更新世条件在引发现存同种种群之间的系统发育地理分化以及将先前存在的系统发育地理多样性进一步塑造为当今许多姊妹物种方面发挥了重要作用;(iii)对于两栖爬行动物和鱼类,根据目前合理的替代线粒体DNA速率校准,推断出的更新世生物地理学对当今分类群的影响有所不同。

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本文引用的文献

1
Pleistocene phylogeographic effects on avian populations and the speciation process.更新世系统发育地理学对鸟类种群及物种形成过程的影响。
Proc Biol Sci. 1998 Mar 22;265(1395):457-63. doi: 10.1098/rspb.1998.0317.
2
Rapid rate of control-region evolution in Pacific butterflyfishes (Chaetodontidae).太平洋蝴蝶鱼(蝴蝶鱼科)控制区的快速进化速率
J Mol Evol. 1997 Nov;45(5):473-84. doi: 10.1007/pl00006252.
3
Incipient species formation in salamanders of the Ensatina complex.隐鳃鲵属复合体蝾螈的初始物种形成
Proc Natl Acad Sci U S A. 1997 Jul 22;94(15):7761-7. doi: 10.1073/pnas.94.15.7761.
4
Body size, metabolic rate, generation time, and the molecular clock.身体大小、代谢率、世代时间和分子钟。
Proc Natl Acad Sci U S A. 1993 May 1;90(9):4087-91. doi: 10.1073/pnas.90.9.4087.
5
Evolutionary analysis of cytochrome b sequences in some Perciformes: evidence for a slower rate of evolution than in mammals.一些鲈形目鱼类细胞色素b序列的进化分析:进化速率比哺乳动物慢的证据。
J Mol Evol. 1994 Dec;39(6):589-97. doi: 10.1007/BF00160404.
6
Molecular support for vicariance as a source of diversity in rainforest.作为雨林多样性来源的地理隔离的分子证据。
Proc Biol Sci. 1995 May 22;260(1358):177-82. doi: 10.1098/rspb.1995.0077.
7
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences.一种通过核苷酸序列比较研究来估计碱基替换进化速率的简单方法。
J Mol Evol. 1980 Dec;16(2):111-20. doi: 10.1007/BF01731581.
8
Dynamics of mitochondrial DNA evolution in animals: amplification and sequencing with conserved primers.动物线粒体DNA进化的动力学:用保守引物进行扩增和测序
Proc Natl Acad Sci U S A. 1989 Aug;86(16):6196-200. doi: 10.1073/pnas.86.16.6196.
9
Monophyletic origin of Lake Victoria cichlid fishes suggested by mitochondrial DNA sequences.线粒体DNA序列表明维多利亚湖丽鱼科鱼类的单系起源。
Nature. 1990 Oct 11;347(6293):550-3. doi: 10.1038/347550a0.
10
Mitochondrial DNA evolution at a turtle's pace: evidence for low genetic variability and reduced microevolutionary rate in the Testudines.龟速进化的线粒体DNA:龟鳖目低遗传变异性和微进化速率降低的证据
Mol Biol Evol. 1992 May;9(3):457-73. doi: 10.1093/oxfordjournals.molbev.a040735.