Neal B L, Asthagiri D, Lenhoff A M
Center for Molecular and Engineering Thermodynamics, Department of Chemical Engineering, University of Delaware, Newark, Delaware 19716, USA.
Biophys J. 1998 Nov;75(5):2469-77. doi: 10.1016/S0006-3495(98)77691-X.
The thermodynamic properties of protein solutions are determined by the molecular interactions involving both solvent and solute molecules. A quantitative understanding of the relationship would facilitate more systematic procedures for manipulating the properties in a process environment. In this work the molecular basis for the osmotic second virial coefficient, B22, is studied; osmotic effects are critical in membrane transport, and the value of B22 has also been shown to correlate with protein crystallization behavior. The calculations here account for steric, electrostatic, and short-range interactions, with the structural and functional anisotropy of the protein molecules explicitly accounted for. The orientational dependence of the protein interactions is seen to have a pronounced effect on the calculations; in particular, the relatively few protein-protein configurations in which the apposing surfaces display geometric complementarity contribute disproportionately strongly to B22. The importance of electrostatic interactions is also amplified in these high-complementarity configurations. The significance of molecular recognition in determining B22 can explain the correlation with crystallization behavior, and it suggests that alteration of local molecular geometry can help in manipulating protein solution behavior. The results also have implications for the role of protein interactions in biological self-organization.
蛋白质溶液的热力学性质由涉及溶剂和溶质分子的分子间相互作用决定。对这种关系的定量理解将有助于在过程环境中更系统地控制这些性质。在这项工作中,研究了渗透第二维里系数B22的分子基础;渗透效应在膜运输中至关重要,并且B22的值也已被证明与蛋白质结晶行为相关。此处的计算考虑了空间位阻、静电和短程相互作用,同时明确考虑了蛋白质分子的结构和功能各向异性。蛋白质相互作用的取向依赖性对计算有显著影响;特别是,相对较少的蛋白质-蛋白质构象中,相对表面呈现几何互补性,对B22的贡献 disproportionately 强。在这些高互补性构象中,静电相互作用的重要性也被放大。分子识别在确定B22中的重要性可以解释其与结晶行为的相关性,这表明局部分子几何结构的改变有助于控制蛋白质溶液行为。这些结果也对蛋白质相互作用在生物自组织中的作用具有启示意义。