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关于酶促反应中低势垒氢键的电子性质

On the electronic nature of low-barrier hydrogen bonds in enzymatic reactions.

作者信息

Schiøtt B, Iversen B B, Madsen G K, Larsen F K, Bruice T C

机构信息

Department of Chemistry, University of California, Santa Barbara, CA 93106, USA.

出版信息

Proc Natl Acad Sci U S A. 1998 Oct 27;95(22):12799-802. doi: 10.1073/pnas.95.22.12799.

Abstract

The electronic nature of low-barrier hydrogen bonds (LBHBs) in enzymatic reactions is discussed based on combined low temperature neutron and x-ray diffraction experiments and on high level ab initio calculations by using the model substrate benzoylacetone. This molecule has a LBHB, as the intramolecular hydrogen bond is described by a double-well potential with a small barrier for hydrogen transfer. From an "atoms in molecules" analysis of the electron density, it is found that the hydrogen atom is stabilized by covalent bonds to both oxygens. Large atomic partial charges on the hydrogen-bonded atoms are found experimentally and theoretically. Therefore, the hydrogen bond gains stabilization from both covalency and from the normal electrostatic interactions found for long, weak hydrogen bonds. Based on comparisons with other systems having short-strong hydrogen bonds or LBHBs, it is proposed that all short-strong and LBHB systems possess similar electronic features of the hydrogen-bonded region, namely polar covalent bonds between the hydrogen atom and both heteroatoms in question.

摘要

基于低温中子和X射线衍射联合实验以及使用模型底物苯甲酰丙酮进行的高水平从头算计算,讨论了酶促反应中低势垒氢键(LBHBs)的电子性质。该分子具有一个LBHB,因为分子内氢键由双阱势描述,氢转移的势垒较小。通过对电子密度的“分子中的原子”分析发现,氢原子通过与两个氧原子的共价键而稳定。在实验和理论上都发现了氢键原子上较大的原子部分电荷。因此,氢键从共价性以及长程弱氢键中常见的正常静电相互作用中获得稳定性。基于与其他具有短强氢键或LBHBs的系统的比较,提出所有短强氢键系统和LBHBs系统在氢键区域都具有相似的电子特征,即氢原子与所讨论的两个杂原子之间的极性共价键。

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Response.反应
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