• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

一种耐热酯酶的定向进化

Directed evolution of a thermostable esterase.

作者信息

Giver L, Gershenson A, Freskgard P O, Arnold F H

机构信息

Division of Chemistry and Chemical Engineering, Mail Code 210-41, California Institute of Technology, Pasadena, CA 91125, USA.

出版信息

Proc Natl Acad Sci U S A. 1998 Oct 27;95(22):12809-13. doi: 10.1073/pnas.95.22.12809.

DOI:10.1073/pnas.95.22.12809
PMID:9788996
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC23604/
Abstract

We have used in vitro evolution to probe the relationship between stability and activity in a mesophilic esterase. Previous studies of these properties in homologous enzymes evolved for function at different temperatures have suggested that stability at high temperatures is incompatible with high catalytic activity at low temperatures through mutually exclusive demands on enzyme flexibility. Six generations of random mutagenesis, recombination, and screening stabilized Bacillus subtilis p-nitrobenzyl esterase significantly (>14 degreesC increase in Tm) without compromising its catalytic activity at lower temperatures. Furthermore, analysis of the stabilities and activities of large numbers of random mutants indicates that these properties are not inversely correlated. Although enhanced thermostability does not necessarily come at the cost of activity, the process by which the molecule adapts is important. Mutations that increase thermostability while maintaining low-temperature activity are very rare. Unless both properties are constrained (by natural selection or screening) the evolution of one by the accumulation of single amino acid substitutions typically comes at the cost of the other, regardless of whether the two properties are inversely correlated or not correlated at all.

摘要

我们利用体外进化来探究嗜温酯酶稳定性与活性之间的关系。先前对在不同温度下进化以实现特定功能的同源酶的这些特性的研究表明,由于对酶柔韧性的相互排斥的要求,高温下的稳定性与低温下的高催化活性不相容。经过六代随机诱变、重组和筛选,枯草芽孢杆菌对硝基苄酯酶的稳定性显著提高(熔解温度升高超过14℃),且不影响其在较低温度下的催化活性。此外,对大量随机突变体的稳定性和活性分析表明,这些特性并非呈负相关。虽然增强的热稳定性不一定以活性为代价,但分子适应的过程很重要。在保持低温活性的同时提高热稳定性的突变非常罕见。除非这两种特性都受到限制(通过自然选择或筛选),否则通过单个氨基酸取代的积累来进化其中一种特性通常会以牺牲另一种特性为代价,无论这两种特性是呈负相关还是根本不相关。

相似文献

1
Directed evolution of a thermostable esterase.一种耐热酯酶的定向进化
Proc Natl Acad Sci U S A. 1998 Oct 27;95(22):12809-13. doi: 10.1073/pnas.95.22.12809.
2
Directed evolution of a para-nitrobenzyl esterase for aqueous-organic solvents.用于水-有机溶剂的对硝基苄酯酶的定向进化。
Nat Biotechnol. 1996 Apr;14(4):458-67. doi: 10.1038/nbt0496-458.
3
Directed evolution study of temperature adaptation in a psychrophilic enzyme.嗜冷酶温度适应性的定向进化研究
J Mol Biol. 2000 Apr 7;297(4):1015-26. doi: 10.1006/jmbi.2000.3612.
4
Enhancing the Thermostability of Feruloyl Esterase EstF27 by Directed Evolution and the Underlying Structural Basis.通过定向进化提高阿魏酸酯酶EstF27的热稳定性及其潜在结构基础
J Agric Food Chem. 2015 Sep 23;63(37):8225-33. doi: 10.1021/acs.jafc.5b03424. Epub 2015 Sep 10.
5
Directed evolution to improve the catalytic efficiency of urate oxidase from Bacillus subtilis.通过定向进化提高枯草芽孢杆菌尿酸氧化酶的催化效率。
PLoS One. 2017 May 22;12(5):e0177877. doi: 10.1371/journal.pone.0177877. eCollection 2017.
6
Combinatorial reshaping of a lipase structure for thermostability: additive role of surface stabilizing single point mutations.组合重塑脂肪酶结构以提高热稳定性:表面稳定单点突变的附加作用。
Biochem Biophys Res Commun. 2014 May 16;447(4):626-32. doi: 10.1016/j.bbrc.2014.04.051. Epub 2014 Apr 18.
7
Thermostable Bacillus subtilis lipases: in vitro evolution and structural insight.耐热性枯草芽孢杆菌脂肪酶:体外进化与结构解析
J Mol Biol. 2008 Aug 29;381(2):324-40. doi: 10.1016/j.jmb.2008.05.063. Epub 2008 Jul 2.
8
Directed evolution of subtilisin E in Bacillus subtilis to enhance total activity in aqueous dimethylformamide.枯草芽孢杆菌中枯草杆菌蛋白酶E的定向进化以提高其在二甲基甲酰胺水溶液中的总活性。
Protein Eng. 1996 Jan;9(1):77-83. doi: 10.1093/protein/9.1.77.
9
Structural basis of selection and thermostability of laboratory evolved Bacillus subtilis lipase.实验室进化的枯草芽孢杆菌脂肪酶的选择和热稳定性的结构基础
J Mol Biol. 2004 Aug 27;341(5):1271-81. doi: 10.1016/j.jmb.2004.06.059.
10
Directed evolution of mesophilic enzymes into their thermophilic counterparts.嗜温酶向嗜热酶的定向进化。
Ann N Y Acad Sci. 1999 May 18;870:400-3. doi: 10.1111/j.1749-6632.1999.tb08913.x.

引用本文的文献

1
Directed evolution of α-ketoisovalerate decarboxylase for improved isobutanol and 3-methyl-1-butanol production in cyanobacteria.用于提高蓝细菌中异丁醇和3-甲基-1-丁醇产量的α-酮异戊酸脱羧酶的定向进化
Biotechnol Biofuels Bioprod. 2025 Jul 31;18(1):84. doi: 10.1186/s13068-025-02687-6.
2
Pervasive Divergence in Protein Thermostability is Mediated by Both Structural Changes and Cellular Environments.蛋白质热稳定性的普遍差异由结构变化和细胞环境共同介导。
Mol Biol Evol. 2025 Jul 1;42(7). doi: 10.1093/molbev/msaf137.
3
Deep mutational scanning reveals a de novo disulfide bond and combinatorial mutations for engineering thermostable myoglobin.深度突变扫描揭示了用于工程化耐热肌红蛋白的一个新生二硫键和组合突变。
Protein Sci. 2025 May;34(5):e70112. doi: 10.1002/pro.70112.
4
MMRT: MultiMut Recursive Tree for predicting functional effects of high-order protein variants from low-order variants.MMRT:用于从低阶变体预测高阶蛋白质变体功能效应的多重突变递归树
Comput Struct Biotechnol J. 2025 Feb 18;27:672-681. doi: 10.1016/j.csbj.2025.02.012. eCollection 2025.
5
Reaching New Heights in Genetic Code Manipulation with High Throughput Screening.高通量筛选助力基因密码操作技术新突破
Chem Rev. 2024 Nov 13;124(21):12145-12175. doi: 10.1021/acs.chemrev.4c00329. Epub 2024 Oct 17.
6
Computational Stabilization of a Non-Heme Iron Enzyme Enables Efficient Evolution of New Function.非血红素铁酶的计算稳定化实现新功能的高效进化。
Angew Chem Int Ed Engl. 2025 Jan 10;64(2):e202414705. doi: 10.1002/anie.202414705. Epub 2024 Nov 11.
7
Computational stabilization of a non-heme iron enzyme enables efficient evolution of new function.非血红素铁酶的计算稳定化实现了新功能的高效进化。
bioRxiv. 2024 Jul 25:2024.04.18.590141. doi: 10.1101/2024.04.18.590141.
8
Stability Oracle: a structure-based graph-transformer framework for identifying stabilizing mutations.稳定性预测器:一种基于结构的图变换框架,用于识别稳定化突变。
Nat Commun. 2024 Jul 23;15(1):6170. doi: 10.1038/s41467-024-49780-2.
9
Analysis of proteins in the light of mutations.根据突变分析蛋白质。
Eur Biophys J. 2024 Aug;53(5-6):255-265. doi: 10.1007/s00249-024-01714-y. Epub 2024 Jul 2.
10
A systematic analysis of regression models for protein engineering.蛋白质工程中回归模型的系统分析。
PLoS Comput Biol. 2024 May 3;20(5):e1012061. doi: 10.1371/journal.pcbi.1012061. eCollection 2024 May.

本文引用的文献

1
Directed evolution of a para-nitrobenzyl esterase for aqueous-organic solvents.用于水-有机溶剂的对硝基苄酯酶的定向进化。
Nat Biotechnol. 1996 Apr;14(4):458-67. doi: 10.1038/nbt0496-458.
2
Engineering an enzyme to resist boiling.设计一种能耐高温的酶。
Proc Natl Acad Sci U S A. 1998 Mar 3;95(5):2056-60. doi: 10.1073/pnas.95.5.2056.
3
Enzyme engineering reaches the boiling point.酶工程达到了沸点。
Proc Natl Acad Sci U S A. 1998 Mar 3;95(5):2035-6. doi: 10.1073/pnas.95.5.2035.
4
Directed evolution of enzyme catalysts.酶催化剂的定向进化
Trends Biotechnol. 1997 Dec;15(12):523-30. doi: 10.1016/S0167-7799(97)01138-4.
5
Directed evolution of a fucosidase from a galactosidase by DNA shuffling and screening.通过DNA改组和筛选从半乳糖苷酶定向进化出岩藻糖苷酶。
Proc Natl Acad Sci U S A. 1997 Apr 29;94(9):4504-9. doi: 10.1073/pnas.94.9.4504.
6
Optimizing industrial enzymes by directed evolution.通过定向进化优化工业酶。
Adv Biochem Eng Biotechnol. 1997;58:1-14. doi: 10.1007/BFb0103300.
7
Perspectives on archaeal diversity, thermophily and monophyly from environmental rRNA sequences.基于环境rRNA序列对古菌多样性、嗜热性和单系性的见解。
Proc Natl Acad Sci U S A. 1996 Aug 20;93(17):9188-93. doi: 10.1073/pnas.93.17.9188.
8
Structure and stability of hyperstable proteins: glycolytic enzymes from hyperthermophilic bacterium Thermotoga maritima.超稳定蛋白质的结构与稳定性:来自嗜热栖热菌的糖酵解酶
Adv Protein Chem. 1996;48:181-269. doi: 10.1016/s0065-3233(08)60363-0.
9
Glyceraldehyde-3-phosphate dehydrogenase from Thermotoga maritima: strategies of protein stabilization.嗜热栖热菌的3-磷酸甘油醛脱氢酶:蛋白质稳定化策略
FEMS Microbiol Rev. 1996 May;18(2-3):215-24. doi: 10.1111/j.1574-6976.1996.tb00238.x.
10
Stability and folding of ultrastable proteins: eye lens crystallins and enzymes from thermophiles.超稳定蛋白质的稳定性与折叠:眼晶状体晶状体蛋白及嗜热菌中的酶
FASEB J. 1996 Jan;10(1):84-92. doi: 10.1096/fasebj.10.1.8566552.