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嗜冷黄杆菌新种,一种来自南极淡水湖的可利用乳糖的细菌。

Flavobacterium hibernum sp. nov., a lactose-utilizing bacterium from a freshwater Antarctic lake.

作者信息

McCammon S A, Innes B H, Bowman J P, Franzmann P D, Dobson S J, Holloway P E, Skerratt J H, Nichols P D, Rankin L M

机构信息

Antarctic-CRC, University of Tasmania, Australia.

出版信息

Int J Syst Bacteriol. 1998 Oct;48 Pt 4:1405-12. doi: 10.1099/00207713-48-4-1405.

DOI:10.1099/00207713-48-4-1405
PMID:9828443
Abstract

Four freshwater Antarctic lakes were examined for the presence of beta-galactosidase-producing bacteria using mineral medium enrichments and lactose. Enrichments from only one of the lakes produced growth and two strains were isolated that were very similar in phenotype and fatty acid profile, and shared considerable homology in their DNA (DNA-DNA hybridization = 93 +/- 7%). The strains were psychrotrophic with theoretical Tmax, Tmin and Topt of 30-31, -7 degrees and 26 degrees C, respectively. The beta-galactosidase in cell extracts had an optimal activity at 39 degrees C. The strains were Gram-negative rods, showed gliding motility, contained branched and hydroxy fatty acids, and menaquinone 6 as the major respiratory quinone. The strains did not form microcysts and utilized lactose while using ammonium ions as a source of nitrogen, and a range of other sugars. The G + C content of the DNA was 34 mol%. Phylogenetic analysis of one of the strains, by comparison of 16S rDNA sequences, showed that it was most similar, but not identical to, Flavobacterium columnare and '[Sporocytophaga] cauliformis'. Both species could be differentiated phenotypically from the Antarctic isolates. DNA-DNA hybridization of the Antarctic isolate with six different members of the Flavobacterium 16S rDNA cluster showed no strain with greater than 18% relatedness. The nearest type species to the Antarctic isolate in the phylogenetic analysis was Flavobacterium aquatile. The name Flavobacterium hibernum is proposed for the Antarctic strains, and the type strain is ATCC 51468T (= ACAM 376T).

摘要

利用矿物质培养基富集培养法和乳糖,对四个南极淡水湖进行了产β-半乳糖苷酶细菌的检测。仅从其中一个湖泊的富集培养物中获得了生长,并分离出两株菌株,它们在表型和脂肪酸谱方面非常相似,且DNA具有相当高的同源性(DNA-DNA杂交率 = 93±7%)。这些菌株为嗜冷菌,理论上的最高生长温度(Tmax)、最低生长温度(Tmin)和最适生长温度(Topt)分别为30 - 31℃、-7℃和26℃。细胞提取物中的β-半乳糖苷酶在39℃时具有最佳活性。这些菌株为革兰氏阴性杆菌,表现出滑动运动性,含有分支脂肪酸和羟基脂肪酸,并且以甲基萘醌6作为主要呼吸醌。这些菌株不形成微囊肿,能利用乳糖,同时以铵离子作为氮源,并能利用一系列其他糖类。DNA的G + C含量为34 mol%。通过比较16S rDNA序列对其中一株菌株进行系统发育分析,结果表明它与柱状黄杆菌和“[生孢噬纤维菌属]茎状菌”最为相似,但并不相同。这两个物种在表型上都可以与南极分离株区分开来。南极分离株与黄杆菌16S rDNA簇的六个不同成员进行DNA-DNA杂交,结果显示没有任何菌株的相关性大于18%。在系统发育分析中,与南极分离株最接近的模式种是水生黄杆菌。建议将南极菌株命名为嗜冷黄杆菌,模式菌株为ATCC 51468T(= ACAM 376T)。

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