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INFOGENE:一个关于基因组测序项目序列中已知基因结构以及预测基因和蛋白质的数据库。

INFOGENE: a database of known gene structures and predicted genes and proteins in sequences of genome sequencing projects.

作者信息

Solovyev V V, Salamov A A

机构信息

The Sanger Centre, Hinxton, Cambridge CB10 1SA, UK.

出版信息

Nucleic Acids Res. 1999 Jan 1;27(1):248-50. doi: 10.1093/nar/27.1.248.

Abstract

INFOGENE is a database of known and predicted gene structures with descriptions of basic functional signals and gene components. It provides a possibility to create compilations of sequences with a given gene feature as well as to accumulate and analyze predicted genes in finished and unfinished sequences from genome sequencing projects. Protein sequence similarity searches in the database of predicted proteins is offered through the BLASTP program. INFOGENE is realized under the Sequence Retrieval System that provides useful links with the other informational databases. The database is available through the WWW server of the Computational Genomics Group at http://genomic.sanger.ac.uk/db.html

摘要

INFOGENE是一个关于已知和预测基因结构的数据库,其中包含基本功能信号和基因组件的描述。它提供了创建具有特定基因特征的序列汇编的可能性,以及在基因组测序项目的已完成和未完成序列中积累和分析预测基因的功能。通过BLASTP程序,可以在预测蛋白质数据库中进行蛋白质序列相似性搜索。INFOGENE是在序列检索系统下实现的,该系统提供了与其他信息数据库的有用链接。该数据库可通过计算基因组学小组的万维网服务器获取,网址为http://genomic.sanger.ac.uk/db.html

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