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基于总核DNA限制性分析数据的姬鼠属(鼠科,啮齿目)林栖和田野小鼠的分子系统发育

[Molecular phylogeny of forest and field mice of the genus Apodemus (Muridae, Rodentia) based on the data on restriction analysis of total nuclear DNA].

作者信息

Chelomina G N

机构信息

Institute of Biology and Soil Science, Russian Academy of Sciences, Vladivostok, Russia.

出版信息

Genetika. 1998 Sep;34(9):1286-92.

PMID:9879015
Abstract

Based on restriction-fragment length polymorphism (RFLP) of total nuclear DNA (nDNA), analyses of phylogenetic relations and genetic similarity were performed in nine species of forest and field mice of the genus Apodemus. Genetic distances calculated for different species pairs ranged from 0.24 to 12.53%; i.e., the differences were 50-fold. The estimated evolutionary age of the genus Apodemus is approximately 12 million years. In general, the obtained data on genetic similarity and phylogenetic relationship allow us to differentiate at least three groups of species: (1) southern Paleoarctic (A. argenteus), (2) eastern (A. peninsulae, A. speciosus, and A. agrarius), and (3) western (A. sylvaticus, A. flavicollis, A. ponticus, A. uralensis, and A. fulvipectus) ones. The latter two groups are related to the northern Paleoarctic. Such a division into groups corresponds to characteristic features of karyotype organization and segmentation of satellite DNA (satDNA) of these species, as well as the nature of variation in isozymes and in a fragment of the enzyme-encoding sequence of cytochrome b gene isolated from the mitochondrial genome. Species groups (1) and (3) exhibited a high probability of a monophyletic origin (70 and 99%, respectively). Group (2) is unlikely to be monophyletic, and the genetic distances in it are significantly greater than those in group 3. A. argenteus is the most diverged, both phenogenetically and phylogenetically. The data are consistent with a new zoological classification, which assumes the division of the unified genus Apodemus into two taxa of generic rank and suggest that the southern Paleoarctic forest mouse should be regarded as a separate taxon of at least subgeneric rank.

摘要

基于总核DNA(nDNA)的限制性片段长度多态性(RFLP),对姬鼠属的9种森林和田野小鼠进行了系统发育关系和遗传相似性分析。不同物种对之间计算出的遗传距离在0.24%至12.53%之间;即差异达50倍。姬鼠属的估计进化年龄约为1200万年。总体而言,所获得的关于遗传相似性和系统发育关系的数据使我们能够区分至少三组物种:(1)南古北区(中华姬鼠),(2)东部(半岛姬鼠、大林姬鼠和黑线姬鼠),以及(3)西部(林姬鼠、黄颈姬鼠、 Ponticus姬鼠、乌拉尔姬鼠和黄胸姬鼠)的物种。后两组与北古北区有关。这种分组与这些物种的核型组织特征、卫星DNA(satDNA)的分段以及同工酶的变异性质以及从线粒体基因组分离的细胞色素b基因的酶编码序列片段的变异性质相对应。物种组(1)和(3)表现出单系起源的高概率(分别为70%和99%)。组(2)不太可能是单系的,并且其中的遗传距离明显大于组3中的遗传距离。中华姬鼠在表型和系统发育上都是分歧最大的。这些数据与新的动物分类学一致,该分类学假设将统一的姬鼠属分为两个属级分类单元,并表明南古北区森林小鼠应被视为至少亚属级别的单独分类单元。

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