Ullman K S, Shah S, Powers M A, Forbes D J
Department of Biology, University of California at San Diego, La Jolla, California 92093-0347, USA.
Mol Biol Cell. 1999 Mar;10(3):649-64. doi: 10.1091/mbc.10.3.649.
The fundamental process of nucleocytoplasmic transport takes place through the nuclear pore. Peripheral pore structures are presumably poised to interact with transport receptors and their cargo as these receptor complexes first encounter the pore. One such peripheral structure likely to play an important role in nuclear export is the basket structure located on the nuclear side of the pore. At present, Nup153 is the only nucleoporin known to localize to the surface of this basket, suggesting that Nup153 is potentially one of the first pore components an RNA or protein encounters during export. In this study, anti-Nup153 antibodies were used to probe the role of Nup153 in nuclear export in Xenopus oocytes. We found that Nup153 antibodies block three major classes of RNA export, that of snRNA, mRNA, and 5S rRNA. Nup153 antibodies also block the NES protein export pathway, specifically the export of the HIV Rev protein, as well as Rev-dependent RNA export. Not all export was blocked; Nup153 antibodies did not impede the export of tRNA or the recycling of importin beta to the cytoplasm. The specific antibodies used here also did not affect nuclear import, whether mediated by importin alpha/beta or by transportin. Overall, the results indicate that Nup153 is crucial to multiple classes of RNA and protein export, being involved at a vital juncture point in their export pathways. This juncture point appears to be one that is bypassed by tRNA during its export. We asked whether a physical interaction between RNA and Nup153 could be observed, using homoribopolymers as sequence-independent probes for interaction. Nup153, unlike four other nucleoporins including Nup98, associated strongly with poly(G) and significantly with poly(U). Thus, Nup153 is unique among the nucleoporins tested in its ability to interact with RNA and must do so either directly or indirectly through an adaptor protein. These results suggest a unique mechanistic role for Nup153 in the export of multiple cargos.
核质运输的基本过程通过核孔进行。当运输受体复合物首次遇到核孔时,核孔的周边结构可能随时准备与运输受体及其货物相互作用。一种可能在核输出中起重要作用的周边结构是位于核孔核侧的篮状结构。目前,Nup153是已知定位于该篮状结构表面的唯一核孔蛋白,这表明Nup153可能是RNA或蛋白质在输出过程中遇到的首批核孔成分之一。在本研究中,抗Nup153抗体被用于探究Nup153在非洲爪蟾卵母细胞核输出中的作用。我们发现Nup153抗体阻断了三类主要的RNA输出,即snRNA、mRNA和5S rRNA的输出。Nup153抗体还阻断了NES蛋白输出途径,特别是HIV Rev蛋白的输出以及Rev依赖性RNA输出。并非所有输出都被阻断;Nup153抗体并不妨碍tRNA的输出或输入蛋白β向细胞质的循环利用。这里使用的特异性抗体也不影响核输入,无论其是由输入蛋白α/β介导还是由运输蛋白介导。总体而言,结果表明Nup153对多类RNA和蛋白质输出至关重要,在它们的输出途径中处于关键节点。这个节点似乎是tRNA在输出过程中绕过的一个节点。我们使用同聚核糖聚合物作为相互作用的序列非依赖性探针,来探究是否能观察到RNA与Nup153之间的物理相互作用。与包括Nup9八在内的其他四种核孔蛋白不同,Nup153与聚(G)强烈结合,与聚(U)也有显著结合。因此,在测试的核孔蛋白中,Nup153在与RNA相互作用的能力方面是独特的,并且它必须直接或通过衔接蛋白间接与RNA相互作用。这些结果表明Nup153在多种货物的输出中具有独特的机制作用。