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均相核酸分析中的荧光偏振

Fluorescence polarization in homogeneous nucleic acid analysis.

作者信息

Chen X, Levine L, Kwok P Y

机构信息

Division of Dermatology and Department of Genetics, Washington University School of Medicine, St. Louis, Missouri 63110, USA.

出版信息

Genome Res. 1999 May;9(5):492-8.

PMID:10330129
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC310763/
Abstract

A new method for DNA diagnostics based on template-directed primer extension and detection by fluorescence polarization is described. In this method, amplified genomic DNA containing a polymorphic locus is incubated with oligonucleotide primers (designed to hybridize to the DNA template adjacent to the polymorphic site) in the presence of allele-specific dye-labeled dideoxyribonucleoside triphosphates and a commercially available modified Taq DNA polymerase. The primer is extended by the dye-terminator specific for the allele present on the template, increasing approximately 10-fold the molecular weight of the fluorophore. At the end of the reaction, the fluorescence polarization of the two dye-terminators in the reaction mixture are analyzed directly without separation or purification. This homogeneous DNA diagnostic method is shown to be highly sensitive and specific and is suitable for automated genotyping of large number of samples. [The data shown in Figure 3 are available as an online supplement at.]

摘要

描述了一种基于模板导向引物延伸和荧光偏振检测的DNA诊断新方法。在该方法中,将含有多态性位点的扩增基因组DNA与寡核苷酸引物(设计用于与多态性位点相邻的DNA模板杂交)在等位基因特异性染料标记的双脱氧核糖核苷三磷酸和市售修饰的Taq DNA聚合酶存在下孵育。引物由模板上存在的等位基因特异性的染料终止剂延伸,使荧光团的分子量增加约10倍。反应结束时,直接分析反应混合物中两种染料终止剂的荧光偏振,无需分离或纯化。这种均相DNA诊断方法显示出高度灵敏和特异,适用于大量样品的自动化基因分型。[图3所示数据可作为在线补充资料获取。]

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本文引用的文献

1
Solid-phase minisequencing as a tool to detect DNA polymorphism.作为检测DNA多态性工具的固相微测序
Methods Mol Biol. 1998;98:291-8. doi: 10.1385/0-89603-443-7:291.
2
Large-scale identification, mapping, and genotyping of single-nucleotide polymorphisms in the human genome.人类基因组中单核苷酸多态性的大规模鉴定、定位及基因分型
Science. 1998 May 15;280(5366):1077-82. doi: 10.1126/science.280.5366.1077.
3
Multicolor molecular beacons for allele discrimination.用于等位基因区分的多色分子信标。
Nat Biotechnol. 1998 Jan;16(1):49-53. doi: 10.1038/nbt0198-49.
4
Fluorescence energy transfer detection as a homogeneous DNA diagnostic method.荧光能量转移检测作为一种均相DNA诊断方法。
Proc Natl Acad Sci U S A. 1997 Sep 30;94(20):10756-61. doi: 10.1073/pnas.94.20.10756.
5
A homogeneous method for genotyping with fluorescence polarization.一种用于基因分型的荧光偏振均相方法。
Clin Chem. 1997 Aug;43(8 Pt 1):1336-41.
6
Minisequencing: a specific tool for DNA analysis and diagnostics on oligonucleotide arrays.微测序:一种用于寡核苷酸阵列上DNA分析和诊断的特定工具。
Genome Res. 1997 Jun;7(6):606-14. doi: 10.1101/gr.7.6.606.
7
Template-directed dye-terminator incorporation (TDI) assay: a homogeneous DNA diagnostic method based on fluorescence resonance energy transfer.模板导向的染料终止剂掺入(TDI)分析:一种基于荧光共振能量转移的均相DNA诊断方法。
Nucleic Acids Res. 1997 Jan 15;25(2):347-53. doi: 10.1093/nar/25.2.347.
8
Fluorescence anisotropy: rapid, quantitative assay for protein-DNA and protein-protein interaction.荧光各向异性:蛋白质 - DNA及蛋白质 - 蛋白质相互作用的快速定量测定法。
Methods Enzymol. 1996;274:492-503. doi: 10.1016/s0076-6879(96)74039-9.
9
AmpliTaq DNA polymerase, FS dye-terminator sequencing: analysis of peak height patterns.AmpliTaq DNA聚合酶,FS染料终止子测序:峰高模式分析
Biotechniques. 1996 Oct;21(4):694-9. doi: 10.2144/96214rr02.
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Detection of Mycobacterium tuberculosis DNA with thermophilic strand displacement amplification and fluorescence polarization.利用嗜热链置换扩增和荧光偏振检测结核分枝杆菌DNA。
Clin Chem. 1996 Oct;42(10):1604-8.