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大肠杆菌乳糖酶β-半乳糖苷酶与某些β-D-吡喃半乳糖苷竞争性抑制剂的相互作用

Interaction of the lacZ beta-galactosidase of Escherichia coli with some beta-D-galactopyranoside competitive inhibitors.

作者信息

Loeffler R S, Sinnott M L, Sykes B D, Withers S G

出版信息

Biochem J. 1979 Jan 1;177(1):145-52. doi: 10.1042/bj1770145.

DOI:10.1042/bj1770145
PMID:106843
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1186350/
Abstract
  1. The location of the bivalent metal cation with respect to bound competitive inhibitors in Escherichia coli (lacZ) beta-galactosidase was investigated by proton magnetic resonance. 2. Replacement of Mg(2+) by Mn(2+) enhances both longitudinal and transverse relaxation of the methyl groups of the beta-d-galactopyranosyltrimethylammonium ion, and of methyl 1-thio-beta-d-galactopyranoside; linewidths are narrowed by increasing temperature. 3. The Mn(2+) ion is located 8-9A (0.8-0.9nm) from the centroid of the trimethylammonium group and 9A (0.9nm) from the average position of the methylthio protons. 4. The effective charge at the active site was probed by measurement of competitive inhibition constants (K(i) (o) and K(i) (+) respectively) for the isosteric ligands, beta-d-galactopyranosylbenzene and the beta-d-galactopyranosylpyridinium ion. 5. The ratio of inhibition constants (Q=K(i) (+)/K(i) (o)) obtained with 2-(beta-d-galactopyranosyl)-naphthalene and the beta-d-galactopyranosylisoquinolinium ion at pH7 with Mg(2+)-enzyme was identical, within experimental error, with that obtained with the monocyclic compounds. 6. The variation of Q for Mg(2+)-enzyme can be described by Q=0.1(1+[H(+)]/4.17x10(-10))/1+[H(+)]/10(-8)). 7. This, in the theoretical form for a single ionizable group, is ascribed to the ionization of the phenolic hydroxy group of tyrosine-501. 8. The variation of Q for Mg(2+)-free enzyme is complex, probably because of deprotonation of the groups normally attached to Mg(2+) as well as tyrosine-501.
摘要
  1. 通过质子磁共振研究了大肠杆菌(lacZ)β-半乳糖苷酶中二价金属阳离子相对于结合的竞争性抑制剂的位置。2. 用Mn(2+)取代Mg(2+)会增强β-d-吡喃半乳糖基三甲基铵离子和甲基1-硫代-β-d-吡喃半乳糖苷甲基基团的纵向和横向弛豫;线宽随温度升高而变窄。3. Mn(2+)离子距离三甲基铵基团质心8 - 9埃(0.8 - 0.9纳米),距离甲硫基质子的平均位置9埃(0.9纳米)。4. 通过测量等排体配体β-d-吡喃半乳糖基苯和β-d-吡喃半乳糖基吡啶鎓离子的竞争性抑制常数(分别为K(i) (o)和K(i) (+))来探测活性位点的有效电荷。5. 在pH7条件下,用Mg(2+) - 酶时,2-(β-d-吡喃半乳糖基)-萘和β-d-吡喃半乳糖基异喹啉鎓离子得到的抑制常数之比(Q = K(i) (+)/K(i) (o)),在实验误差范围内,与用单环化合物得到的相同。6. Mg(2+) - 酶的Q值变化可用Q = 0.1(1 + [H(+)]/4.17×10(-10))/1 + [H(+)]/10(-8))来描述。7. 以单个可电离基团的理论形式,这归因于酪氨酸-501酚羟基的电离。8. 无Mg(2+)酶的Q值变化很复杂,可能是因为通常与Mg(2+)以及酪氨酸-501相连的基团发生了去质子化。

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本文引用的文献

1
-galactosidase-catalysed hydrolysis of -D-galactopyranosyl azide.β-半乳糖苷酶催化的β-D-吡喃半乳糖叠氮化物的水解。
Biochem J. 1971 Dec;125(3):717-9. doi: 10.1042/bj1250717.
2
pH dependence of the activity of beta-galactosidase from Escherichia coli.大肠杆菌β-半乳糖苷酶活性的pH依赖性
Eur J Biochem. 1971 Jun 11;20(3):363-70. doi: 10.1111/j.1432-1033.1971.tb01402.x.
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The role of magnesium ions in beta-galactosidase hydrolyses. Studies on charge and shape of the beta-galactopyranosyl binding site.镁离子在β-半乳糖苷酶水解中的作用。β-吡喃半乳糖基结合位点的电荷与形状研究。
Biochem J. 1973 May;133(1):99-104. doi: 10.1042/bj1330099.
4
Nuclear magnetic resonance studies of carbonic anhydrase. Binding of sulfacetamide to the manganese enzyme.碳酸酐酶的核磁共振研究。磺胺醋酰与锰酶的结合。
Biochemistry. 1972 Sep 12;11(19):3536-44. doi: 10.1021/bi00769a008.
5
The mechanism of action of beta-galactosidase. Effect of aglycone nature and -deuterium substitution on the hydrolysis of aryl galactosides.β-半乳糖苷酶的作用机制。糖苷配基性质和氘取代对芳基半乳糖苷水解的影响。
Biochem J. 1973 May;133(1):89-98. doi: 10.1042/bj1330089.
6
High-level production of -galactosidase by Escherichia coli merodiploids.大肠杆菌部分二倍体高水平生产β-半乳糖苷酶。
J Bacteriol. 1972 Nov;112(2):856-60. doi: 10.1128/jb.112.2.856-860.1972.
7
The beta-galactosidase-catalysed hydrolyses of beta-d-galactopyranosyl pyridium salts. Rate-limiting generation of an enzyme-bound galactopyranosyl cation in a process dependent only on aglycone acidity.β-半乳糖苷酶催化的β-D-吡喃半乳糖基吡啶盐的水解。在仅取决于糖苷配基酸度的过程中,酶结合的吡喃半乳糖基阳离子的限速生成。
Biochem J. 1974 Dec;143(3):751-62. doi: 10.1042/bj1430751.
8
The amino acid sequence of beta-galactosidase of Escherichia coli.大肠杆菌β-半乳糖苷酶的氨基酸序列。
Proc Natl Acad Sci U S A. 1977 Apr;74(4):1507-10. doi: 10.1073/pnas.74.4.1507.
9
The necessity of magnesium cation for acid assistance aglycone departure in catalysis by Escherichia coli (lacZ) beta-galactosidase.镁阳离子在大肠杆菌(lacZ)β-半乳糖苷酶催化中对酸辅助糖苷配基离去的必要性。
Biochem J. 1978 Nov 1;175(2):539-46. doi: 10.1042/bj1750539.
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Affinity labelling with a deaminatively generated carbonium ion. Kinetics and stoicheiometry of the alkylation of methionine-500 of the lacZ beta-galactosidase of Escherichia coli by beta-D-galactopyranosylmethyl-p-nitrophenyltriazene.用脱氨基产生的碳正离子进行亲和标记。β-D-吡喃半乳糖基甲基对硝基苯基三氮烯对大肠杆菌乳糖Zβ-半乳糖苷酶甲硫氨酸-500烷基化的动力学和化学计量学。
Biochem J. 1978 Nov 1;175(2):525-38. doi: 10.1042/bj1750525.