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嗜热栖热放线菌6家族纤维素酶的结构与功能:内切葡聚糖酶Cel6B在1.6埃分辨率下的结构

Structure and function of Humicola insolens family 6 cellulases: structure of the endoglucanase, Cel6B, at 1.6 A resolution.

作者信息

Davies G J, Brzozowski A M, Dauter M, Varrot A, Schülein M

机构信息

Department of Chemistry, University of York, Heslington, York YO10 5DD, U.K.

出版信息

Biochem J. 2000 May 15;348 Pt 1(Pt 1):201-7.

PMID:10794732
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1221054/
Abstract

Cellulases are traditionally classified as either endoglucanases or cellobiohydrolases on the basis of their respective catalytic activities on crystalline cellulose, which is generally hydrolysed more efficiently only by the cellobiohydrolases. On the basis of the Trichoderma reesei cellobiohydrolase II structure, it was proposed that the active-site tunnel of cellobiohydrolases permitted the processive hydrolysis of cellulose, whereas the corresponding endoglucanases would display open active-site clefts [Rouvinen, Bergfors, Teeri, Knowles and Jones (1990) Science 249, 380-386]. Glycoside hydrolase family 6 contains both cellobiohydrolases and endoglucanases. The structure of the catalytic core of the family 6 endoglucanase Cel6B from Humicola insolens has been solved by molecular replacement with the known T. reesei cellobiohydrolase II as the search model. Strangely, at the sequence level, this enzyme exhibits the highest sequence similarity to family 6 cellobiohydrolases and displays just one of the loop deletions traditionally associated with endoglucanases in this family. However, this enzyme shows no activity on crystalline substrates but a high activity on soluble substrates, which is typical of an endoglucanase. The three-dimensional structure reveals that the deletion of just a single loop of the active site, coupled with the resultant conformational change in a second 'cellobiohydrolase-specific' loop, peels open the active-site tunnel to reveal a substrate-binding groove.

摘要

传统上,纤维素酶根据其对结晶纤维素的各自催化活性分为内切葡聚糖酶或纤维二糖水解酶,而结晶纤维素通常仅由纤维二糖水解酶更有效地水解。基于里氏木霉纤维二糖水解酶II的结构,有人提出纤维二糖水解酶的活性位点通道允许纤维素的连续水解,而相应的内切葡聚糖酶则显示出开放的活性位点裂缝[鲁维宁、贝格福斯、泰里、诺尔斯和琼斯(1990年)《科学》249卷,380 - 386页]。糖苷水解酶家族6既包含纤维二糖水解酶也包含内切葡聚糖酶。以已知的里氏木霉纤维二糖水解酶II为搜索模型,通过分子置换解析了嗜热栖热放线菌家族6内切葡聚糖酶Cel6B催化核心的结构。奇怪的是,在序列水平上,这种酶与家族6纤维二糖水解酶表现出最高的序列相似性,并且只显示出该家族中传统上与内切葡聚糖酶相关的一个环缺失。然而,这种酶对结晶底物没有活性,但对可溶性底物具有高活性,这是内切葡聚糖酶的典型特征。三维结构显示,仅活性位点的一个单环缺失,再加上第二个“纤维二糖水解酶特异性”环的构象变化,打开了活性位点通道,露出一个底物结合凹槽。

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Crystal structure of the catalytic core domain of the family 6 cellobiohydrolase II, Cel6A, from Humicola insolens, at 1.92 A resolution.嗜热栖热放线菌来源的6家族纤维二糖水解酶II(Cel6A)催化核心结构域的晶体结构,分辨率为1.92埃。
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