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嗜热栖热放线菌7家族内切葡聚糖酶I(Cel7B)在2.2埃分辨率下的晶体结构以及通过捕获共价糖基酶中间体鉴定催化亲核试剂。

Crystal structure of the family 7 endoglucanase I (Cel7B) from Humicola insolens at 2.2 A resolution and identification of the catalytic nucleophile by trapping of the covalent glycosyl-enzyme intermediate.

作者信息

MacKenzie L F, Sulzenbacher G, Divne C, Jones T A, Wöldike H F, Schülein M, Withers S G, Davies G J

机构信息

Department of Chemistry, University of British Columbia, Vancouver, V6T 1Z1, Canada.

出版信息

Biochem J. 1998 Oct 15;335 ( Pt 2)(Pt 2):409-16. doi: 10.1042/bj3350409.

Abstract

Cellulose is the major polysaccharide component of the plant cell wall and the most abundant naturally produced macromolecule on Earth. The enzymic degradation of cellulose, by cellulases, is therefore of great environmental and commercial significance. Cellulases are found in 12 of the glycoside hydrolase families classified according to their amino acid sequence similarities. Endoglucanase I (Cel7B), from the soft-rot fungus Humicola insolens, is a family 7 enzyme. The structure of the native form of Cel7B from H. insolens at 2.2 A resolution has been solved by molecular replacement using the known Trichoderma reesei cellobiohydrolase I [Divne, Ståhlberg, Reinikainen, Ruohonen, Pettersson, Knowles, Teeri and Jones (1994) Science 265, 524-528] structure as the search model. Cel7B catalyses hydrolysis of the beta-1,4 glycosidic linkages in cellulose with net retention of anomeric configuration. The catalytic nucleophile at the active site of Cel7B has been identified as Glu-197 by trapping of a 2-deoxy-2-fluorocellotriosyl enzyme intermediate and identification of the labelled peptide in peptic digests by tandem MS. Site-directed mutagenesis of both Glu-197 and the prospective catalytic acid, Glu-202, results in inactive enzyme, confirming the critical role of these groups for catalysis.

摘要

纤维素是植物细胞壁的主要多糖成分,也是地球上天然产生的最为丰富的大分子。因此,纤维素酶对纤维素的酶促降解具有重大的环境和商业意义。根据氨基酸序列相似性分类的12个糖苷水解酶家族中均发现了纤维素酶。来自软腐真菌特异腐质霉的内切葡聚糖酶I(Cel7B)属于7家族酶。利用已知的里氏木霉纤维二糖水解酶I [Divne、Ståhlberg、Reinikainen、Ruohonen、Pettersson、Knowles、Teeri和Jones(1994年)《科学》265, 524 - 528] 的结构作为搜索模型,通过分子置换法解析了特异腐质霉天然形式Cel7B在2.2 Å分辨率下的结构。Cel7B催化纤维素中β-1,4糖苷键的水解,同时端基构型净保留。通过捕获2-脱氧-2-氟纤维三糖基酶中间体,并通过串联质谱鉴定胃蛋白酶消化物中的标记肽段,已确定Cel7B活性位点的催化亲核试剂为Glu-197。对Glu-197和预期的催化酸Glu-202进行定点诱变均导致酶失活,证实了这些基团在催化中的关键作用。

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