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在由N-乙酰苯丙氨酰-5RNA起始的聚苯丙氨酸合成中30S起始复合物形成的必要性的动力学证据。

Kinetic evidence for the obligatory formation of a 30S initiation complex in polyphenylalanine synthesis initiated with N-acetylphenylalanyl-5RNA.

作者信息

Blumberg B M, Nakamoto T, Goldberg I S

出版信息

Biochemistry. 1975 Jul;14(13):2889-94. doi: 10.1021/bi00684a015.

DOI:10.1021/bi00684a015
PMID:1096935
Abstract

The problem of whether the initiation of bacterial protein synthesis involves the obligatory formation of a 30S initiation complex intermediate was examined in a model system with N-acetylphenylalanyl-tRNA as initiator 5RNA nad poly(uridylic acid) as mRNA. The time courses of the formation of the 30S and 70S initiation complex with Escherichia coli ribosomes were measured simultaneously by stopping the reaction with dextran sulfate and differentiating the N-acetylphenylalanyl-tRNA bound to 30S ribosomal subunits from that bound to 70S ribosomes with RNase I, which hydrolyzes N-acetylphenylalanyl-tRNA bound to 30S subunits but not that bound to 70S ribosomes. A maximum in the 30S complex concentration was observed within the first 10-15 sec of the reaction, whereas 70S complex formed formed more slowly with a slight initial time lag. When an analog computer was programmed with rate constants determined separately for the formation of the 30S initiation complex from preformed 30S complex, kinetic curves very similar to the empirical curves were obtained for the entire time course of the reaction. The results show clearly that formation of the 70S complex obeys the kinetic laws for consecutive reactions, and the 30S complex is, therefore, an obligatory intermediate in the initiation of polyphenylalanine synthesis in the model system.

摘要

以N - 乙酰苯丙氨酰 - tRNA作为起始5RNA,聚(尿苷酸)作为mRNA的模型系统,研究了细菌蛋白质合成起始是否涉及30S起始复合物中间体的必然形成这一问题。通过用硫酸葡聚糖终止反应,并利用核糖核酸酶I区分与30S核糖体亚基结合的N - 乙酰苯丙氨酰 - tRNA和与70S核糖体结合的N - 乙酰苯丙氨酰 - tRNA,同时测量了大肠杆菌核糖体形成30S和70S起始复合物的时间进程。核糖核酸酶I可水解与30S亚基结合的N - 乙酰苯丙氨酰 - tRNA,但不能水解与70S核糖体结合的N - 乙酰苯丙氨酰 - tRNA。在反应的最初10 - 15秒内观察到30S复合物浓度达到最大值,而70S复合物形成得更慢,最初有轻微的时间延迟。当用分别为从预先形成的30S复合物形成30S起始复合物确定的速率常数对模拟计算机进行编程时,在反应的整个时间进程中获得了与经验曲线非常相似的动力学曲线。结果清楚地表明,70S复合物的形成遵循连续反应的动力学规律,因此,在该模型系统中,30S复合物是聚苯丙氨酸合成起始过程中的一个必然中间体。

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Kinetic evidence for the obligatory formation of a 30S initiation complex in polyphenylalanine synthesis initiated with N-acetylphenylalanyl-5RNA.在由N-乙酰苯丙氨酰-5RNA起始的聚苯丙氨酸合成中30S起始复合物形成的必要性的动力学证据。
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Function of individual 30S subunit proteins of Escherichia coli. Effect of specific immunoglobulin fragments (Fab) on activities of ribosomal decoding sites.大肠杆菌30S亚基单个蛋白质的功能。特异性免疫球蛋白片段(Fab)对核糖体解码位点活性的影响。
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引用本文的文献

1
Ribosomal selection of mRNAs with degenerate initiation triplets.核糖体对具有简并起始三联体的mRNA的选择。
Nucleic Acids Res. 2017 Jul 7;45(12):7309-7325. doi: 10.1093/nar/gkx472.
2
Structure of a 30S pre-initiation complex stalled by GE81112 reveals structural parallels in bacterial and eukaryotic protein synthesis initiation pathways.被GE81112阻滞的30S预起始复合物的结构揭示了细菌和真核生物蛋白质合成起始途径中的结构相似性。
Nucleic Acids Res. 2017 Feb 28;45(4):2179-2187. doi: 10.1093/nar/gkw1251.
3
Mechanism of codon-anticodon interaction in ribosomes. Direct functional evidence that isolated 30S subunits contain two codon-specific binding sites for transfer RNA.
核糖体中密码子与反密码子相互作用的机制。分离的30S亚基含有两个用于转运RNA的密码子特异性结合位点的直接功能证据。
Nucleic Acids Res. 1980 Jan 11;8(1):183-96. doi: 10.1093/nar/8.1.183.
4
Kinetics of initiation of bacterial protein synthesis.细菌蛋白质合成起始的动力学
Proc Natl Acad Sci U S A. 1979 Jan;76(1):251-5. doi: 10.1073/pnas.76.1.251.