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将酚脱硫杆菌重新分类为波罗的海酚脱硫芽孢杆菌新组合,并将菌株SaxT描述为波罗的海脱硫木杆菌新属、新种

Reclassification of Desulfobacterium phenolicum as Desulfobacula phenolica comb. nov. and description of strain SaxT as Desulfotignum balticum gen. nov., sp. nov.

作者信息

Kuever J, Könneke M, Galushko A, Drzyzga O

出版信息

Int J Syst Evol Microbiol. 2001 Jan;51(Pt 1):171-177. doi: 10.1099/00207713-51-1-171.

Abstract

A mesophilic, sulfate-reducing bacterium (strain SaxT) was isolated from marine coastal sediment in the Baltic Sea and originally described as a 'Desulfoarculus' sp. It used a large variety of substrates, ranging from simple organic compounds and fatty acids to aromatic compounds as electron donors. Autotrophic growth was possible with H2, CO2 and formate in the presence of sulfate. Sulfate, thiosulfate and sulfite were used as electron acceptors. Sulfur and nitrate were not reduced. Fermentative growth was obtained with pyruvate, but not with fumarate or malate. Substrate oxidation was usually complete leading to CO2, but at high substrate concentrations acetate accumulated. CO dehydrogenase activity was observed, indicating the operation of the CO dehydrogenase pathway (reverse Wood pathway) for CO2 fixation and complete oxidation of acetyl-CoA. The rod-shaped cells were 0.8-1.0 microm wide and 1.5-2.5 microm long. Spores were not produced and cells stained Gram-negative. The temperature limits for growth were between 10 and 42 degrees C (optimum growth at 28-32 degrees C). Growth was observed at salinities ranging from 5 to 110 g NaCl l(-1), with an optimum at 10-25 g NaCl l(-1). The G+C content of the DNA was 62.4 mol%. Vitamins were required for growth. Based on the 16S rRNA gene sequence, strain SaxT represents a new genus within the delta-subclass of the Proteobacteria. The name Desulfotignum balticum gen. nov., sp. nov. is proposed. After the 16S rDNA sequences of all members of the genus Desulfobacterium were published (GenBank accession nos. AJ237601-AJ237604, AJ237606, AJ237607), the need to reclassify most members of the genus Desulfobacterium became obvious due to their strong phylogenetic affiliation to other genera. Here, we propose to reclassify Desulfobacterium phenolicum as Desulfobacula phenolica comb. nov. Desulfotignum balticum, Desulfobacterium phenolicum and Desulfobacula toluolica contain cellular fatty acids which have so far only been found in members of the genus Desulfobacter.

摘要

从波罗的海的海洋沿岸沉积物中分离出一株嗜温性硫酸盐还原菌(菌株SaxT),最初被描述为“脱硫弧菌属”(Desulfoarculus)的一个种。它能利用多种底物,从简单有机化合物、脂肪酸到芳香族化合物作为电子供体。在有硫酸盐存在的情况下,利用氢气、二氧化碳和甲酸可实现自养生长。硫酸盐、硫代硫酸盐和亚硫酸盐用作电子受体。不还原硫和硝酸盐。利用丙酮酸可实现发酵生长,但利用富马酸或苹果酸则不能。底物氧化通常是完全的,产生二氧化碳,但在高底物浓度下会积累乙酸盐。观察到一氧化碳脱氢酶活性,表明存在用于固定二氧化碳和完全氧化乙酰辅酶A的一氧化碳脱氢酶途径(反向伍德途径)。杆状细胞宽0.8 - 1.0微米,长1.5 - 2.5微米。不产芽孢,细胞革兰氏染色阴性。生长的温度范围是10至42摄氏度(最适生长温度为28 - 32摄氏度)。在盐度为5至110克氯化钠/升的范围内观察到生长,最适盐度为10 - 25克氯化钠/升。DNA的G + C含量为62.4摩尔%。生长需要维生素。基于16S rRNA基因序列,菌株SaxT代表变形菌纲δ亚类中的一个新属。提出了新属名脱硫蒂格菌属(Desulfotignum)及新种名波罗的海脱硫蒂格菌(Desulfotignum balticum)。在脱硫杆菌属(Desulfobacterium)所有成员的16S rDNA序列公布后(GenBank登录号:AJ237601 - AJ237604、AJ237606、AJ237607),由于该属大多数成员与其他属有很强的系统发育关联,对其进行重新分类的必要性变得明显。在此,我们提议将酚脱硫杆菌(Desulfobacterium phenolicum)重新分类为酚脱硫棒菌(Desulfobacula phenolica),新组合名。波罗的海脱硫蒂格菌、酚脱硫杆菌和甲苯脱硫棒菌(Desulfobacula toluolica)含有迄今为止仅在脱硫杆菌属成员中发现的细胞脂肪酸。

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