Fortney Nathaniel W, He Shaomei, Converse Brandon J, Boyd Eric S, Roden Eric E
Department of Geoscience, NASA Astrobiology Institute, University of Wisconsin-Madison, Madison, WI, United States.
Department of Bacteriology, University of Wisconsin-Madison, Madison, WI, United States.
Front Microbiol. 2018 Sep 7;9:2075. doi: 10.3389/fmicb.2018.02075. eCollection 2018.
Iron (Fe) redox-based metabolisms likely supported life on early Earth and may support life on other Fe-rich rocky planets such as Mars. Modern systems that support active Fe redox cycling such as Chocolate Pots (CP) hot springs provide insight into how life could have functioned in such environments. Previous research demonstrated that Fe- and Si-rich and slightly acidic to circumneutral-pH springs at CP host active dissimilatory Fe(III) reducing microorganisms. However, the abundance and distribution of Fe(III)-reducing communities at CP is not well-understood, especially as they exist . In addition, the potential for direct Fe(II) oxidation by lithotrophs in CP springs is understudied, in particular when compared to indirect oxidation promoted by oxygen producing Cyanobacteria. Here, a culture-independent approach, including 16S rRNA gene amplicon and shotgun metagenomic sequencing, was used to determine the distribution of putative Fe cycling microorganisms in vent fluids and sediment cores collected along the outflow channel of CP. Metagenome-assembled genomes (MAGs) of organisms native to sediment and planktonic microbial communities were screened for extracellular electron transfer (EET) systems putatively involved in Fe redox cycling and for CO fixation pathways. Abundant MAGs containing putative EET systems were identified as part of the sediment community at locations where Fe(III) reduction activity has previously been documented. MAGs encoding both putative EET systems and CO fixation pathways, inferred to be FeOB, were also present, but were less abundant components of the communities. These results suggest that the majority of the Fe(III) oxides that support Fe(III) reduction are derived from abiotic oxidation. This study provides new insights into the interplay between Fe redox cycling and CO fixation in sustaining chemotrophic communities in CP with attendant implications for other neutral-pH hot springs.
基于铁(Fe)氧化还原的代谢可能曾支持早期地球上的生命,并且可能支持其他富含铁的岩石行星(如火星)上的生命。现代支持活跃铁氧化还原循环的系统,如巧克力壶(CP)温泉,为了解生命在这种环境中如何运作提供了线索。先前的研究表明,CP富含铁和硅且呈微酸性至近中性pH值的温泉中存在活跃的异化铁(III)还原微生物。然而,CP处铁(III)还原群落的丰度和分布尚未得到很好的理解,尤其是它们的实际存在情况。此外,CP温泉中化能无机营养生物直接氧化亚铁(II)的潜力研究不足,特别是与产氧蓝细菌促进的间接氧化相比。在这里,采用了一种不依赖培养的方法,包括16S rRNA基因扩增子和鸟枪法宏基因组测序,来确定沿CP流出通道采集的喷口流体和沉积物岩心中假定的铁循环微生物的分布。对沉积物和浮游微生物群落原生生物的宏基因组组装基因组(MAG)进行筛选,寻找可能参与铁氧化还原循环的细胞外电子转移(EET)系统以及碳固定途径。在先前记录有铁(III)还原活性的位置,含有假定EET系统的丰富MAG被确定为沉积物群落的一部分。同时存在编码假定EET系统和碳固定途径的MAG,推断为铁氧化细菌,但在群落中含量较少。这些结果表明,支持铁(III)还原的大多数铁(III)氧化物来自非生物氧化。这项研究为铁氧化还原循环与碳固定之间的相互作用提供了新的见解,这种相互作用维持了CP中的化学营养群落,并对其他中性pH值温泉具有相应的启示意义。