• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

调控酿酒酵母中三核苷酸重复序列不稳定性的顺式作用元件。

Cis-elements governing trinucleotide repeat instability in Saccharomyces cerevisiae.

作者信息

Rolfsmeier M L, Dixon M J, Pessoa-Brandão L, Pelletier R, Miret J J, Lahue R S

机构信息

Eppley Institute for Research in Cancer and Allied Diseases, University of Nebraska Medical Center, Omaha, Nebraska 68198-6805, USA.

出版信息

Genetics. 2001 Apr;157(4):1569-79. doi: 10.1093/genetics/157.4.1569.

DOI:10.1093/genetics/157.4.1569
PMID:11290713
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1461582/
Abstract

Trinucleotide repeat (TNR) instability in humans is governed by unique cis-elements. One element is a threshold, or minimal repeat length, conferring frequent mutations. Since thresholds have not been directly demonstrated in model systems, their molecular nature remains uncertain. Another element is sequence specificity. Unstable TNR sequences are almost always CNG, whose hairpin-forming ability is thought to promote instability by inhibiting DNA repair. To understand these cis-elements further, TNR expansions and contractions were monitored by yeast genetic assays. A threshold of approximately 15--17 repeats was observed for CTG expansions and contractions, indicating that thresholds function in organisms besides humans. Mutants lacking the flap endonuclease Rad27p showed little change in the expansion threshold, suggesting that this element is not altered by the presence or absence of flap processing. CNG or GNC sequences yielded frequent mutations, whereas A-T rich sequences were substantially more stable. This sequence analysis further supports a hairpin-mediated mechanism of TNR instability. Expansions and contractions occurred at comparable rates for CTG tract lengths between 15 and 25 repeats, indicating that expansions can comprise a significant fraction of mutations in yeast. These results indicate that several unique cis-elements of human TNR instability are functional in yeast.

摘要

人类中的三核苷酸重复序列(TNR)不稳定性受独特的顺式元件调控。其中一个元件是阈值,即最小重复长度,它会导致频繁突变。由于阈值尚未在模型系统中得到直接验证,其分子本质仍不确定。另一个元件是序列特异性。不稳定的TNR序列几乎总是CNG,其形成发夹的能力被认为通过抑制DNA修复来促进不稳定性。为了进一步了解这些顺式元件,通过酵母遗传分析监测了TNR的扩增和收缩。观察到CTG扩增和收缩的阈值约为15 - 17个重复序列,这表明阈值在除人类之外的生物体中也起作用。缺乏瓣状核酸内切酶Rad27p的突变体在扩增阈值上变化不大,这表明该元件不会因瓣状加工的存在与否而改变。CNG或GNC序列会频繁发生突变,而富含A - T的序列则稳定得多。这种序列分析进一步支持了TNR不稳定性的发夹介导机制。对于15至25个重复序列的CTG片段长度,扩增和收缩以相当的速率发生,这表明扩增在酵母突变中可能占很大比例。这些结果表明,人类TNR不稳定性的几个独特顺式元件在酵母中具有功能。

相似文献

1
Cis-elements governing trinucleotide repeat instability in Saccharomyces cerevisiae.调控酿酒酵母中三核苷酸重复序列不稳定性的顺式作用元件。
Genetics. 2001 Apr;157(4):1569-79. doi: 10.1093/genetics/157.4.1569.
2
DNA elements important for CAG*CTG repeat thresholds in Saccharomyces cerevisiae.对酿酒酵母中CAG*CTG重复阈值重要的DNA元件。
Nucleic Acids Res. 2004 Feb 24;32(4):1289-97. doi: 10.1093/nar/gkh292. Print 2004.
3
Tracking Expansions of Stable and Threshold Length Trinucleotide Repeat Tracts In Vivo and In Vitro Using Saccharomyces cerevisiae.利用酿酒酵母在体内和体外追踪稳定及阈值长度三核苷酸重复序列的扩增
Methods Mol Biol. 2020;2056:25-68. doi: 10.1007/978-1-4939-9784-8_3.
4
Saccharomyces cerevisiae Srs2 DNA helicase selectively blocks expansions of trinucleotide repeats.酿酒酵母Srs2 DNA解旋酶可选择性地阻断三核苷酸重复序列的扩增。
Mol Cell Biol. 2004 Sep;24(17):7324-30. doi: 10.1128/MCB.24.17.7324-7330.2004.
5
Human FEN-1 can process the 5'-flap DNA of CTG/CAG triplet repeat derived from human genetic diseases by length and sequence dependent manner.人类FEN-1能够以长度和序列依赖的方式处理源自人类遗传疾病的CTG/CAG三联体重复序列的5'-侧翼DNA。
Exp Mol Med. 2002 Sep 30;34(4):313-7. doi: 10.1038/emm.2002.44.
6
Saccharomyces cerevisiae flap endonuclease 1 uses flap equilibration to maintain triplet repeat stability.酿酒酵母瓣状核酸内切酶1利用瓣平衡来维持三联体重复序列的稳定性。
Mol Cell Biol. 2004 May;24(9):4049-64. doi: 10.1128/MCB.24.9.4049-4064.2004.
7
Nucleotide excision repair and the 26S proteasome function together to promote trinucleotide repeat expansions.核苷酸切除修复和 26S 蛋白酶体共同作用促进三核苷酸重复扩展。
DNA Repair (Amst). 2014 Jan;13:42-9. doi: 10.1016/j.dnarep.2013.11.004. Epub 2013 Dec 17.
8
Haploinsufficiency of yeast FEN1 causes instability of expanded CAG/CTG tracts in a length-dependent manner.酵母FEN1的单倍剂量不足会以长度依赖的方式导致扩展的CAG/CTG序列不稳定。
Gene. 2007 May 15;393(1-2):110-5. doi: 10.1016/j.gene.2007.01.025. Epub 2007 Feb 12.
9
The Saccharomyces cerevisiae Mre11-Rad50-Xrs2 complex promotes trinucleotide repeat expansions independently of homologous recombination.酿酒酵母Mre11-Rad50-Xrs2复合物独立于同源重组促进三核苷酸重复序列扩增。
DNA Repair (Amst). 2016 Jul;43:1-8. doi: 10.1016/j.dnarep.2016.04.012. Epub 2016 May 2.
10
Measuring Dynamic Behavior of Trinucleotide Repeat Tracts In Vivo in Saccharomyces cerevisiae.测量酿酒酵母体内三核苷酸重复序列的动态行为。
Methods Mol Biol. 2018;1672:439-470. doi: 10.1007/978-1-4939-7306-4_30.

引用本文的文献

1
Recurrent DNA nicks drive massive expansions of (GAA) repeats.反复出现的 DNA 缺口导致(GAA)重复序列的大量扩增。
Proc Natl Acad Sci U S A. 2024 Dec 3;121(49):e2413298121. doi: 10.1073/pnas.2413298121. Epub 2024 Nov 25.
2
Identifying unstable CNG repeat loci in the human genome: a heuristic approach and implications for neurological disorders.识别人类基因组中不稳定的CNG重复序列位点:一种启发式方法及其对神经疾病的影响。
Hum Genome Var. 2024 Jun 13;11(1):25. doi: 10.1038/s41439-024-00281-0.
3
Huntington disease update: new insights into the role of repeat instability in disease pathogenesis.亨廷顿病最新进展:对重复序列不稳定性在疾病发病机制中作用的新见解。
Med Genet. 2022 Jan 12;33(4):293-300. doi: 10.1515/medgen-2021-2101. eCollection 2021 Dec.
4
Distribution of the Gene A1 and A2 Haplotypes Worldwide: A Systematic Review.全球基因 A1 和 A2 单倍型的分布:系统评价。
Clin Med Res. 2020 Dec;18(4):145-152. doi: 10.3121/cmr.2020.1523. Epub 2020 Sep 2.
5
Defects in the GINS complex increase the instability of repetitive sequences via a recombination-dependent mechanism.GINS 复合物缺陷通过依赖重组的机制增加重复序列的不稳定性。
PLoS Genet. 2019 Dec 9;15(12):e1008494. doi: 10.1371/journal.pgen.1008494. eCollection 2019 Dec.
6
Cis- and Trans-Modifiers of Repeat Expansions: Blending Model Systems with Human Genetics.重复扩展的顺式和反式修饰物:混合模型系统与人类遗传学。
Trends Genet. 2018 Jun;34(6):448-465. doi: 10.1016/j.tig.2018.02.005. Epub 2018 Mar 19.
7
MSH3 Promotes Dynamic Behavior of Trinucleotide Repeat Tracts In Vivo.MSH3促进体内三核苷酸重复序列的动态行为。
Genetics. 2015 Jul;200(3):737-54. doi: 10.1534/genetics.115.177303. Epub 2015 May 11.
8
Repeat instability during DNA repair: Insights from model systems.DNA修复过程中的重复序列不稳定性:来自模型系统的见解
Crit Rev Biochem Mol Biol. 2015 Mar-Apr;50(2):142-67. doi: 10.3109/10409238.2014.999192. Epub 2015 Jan 22.
9
GFP-based fluorescence assay for CAG repeat instability in cultured human cells.基于绿色荧光蛋白的培养人类细胞中CAG重复序列不稳定性的荧光检测法。
PLoS One. 2014 Nov 25;9(11):e113952. doi: 10.1371/journal.pone.0113952. eCollection 2014.
10
The balancing act of DNA repeat expansions.DNA 重复扩展的平衡行为。
Curr Opin Genet Dev. 2013 Jun;23(3):280-8. doi: 10.1016/j.gde.2013.04.009. Epub 2013 May 29.

本文引用的文献

1
SCA8 CTG repeat: en masse contractions in sperm and intergenerational sequence changes may play a role in reduced penetrance.SCA8基因的CTG重复序列:精子中的整体收缩和代际序列变化可能在降低外显率中起作用。
Hum Mol Genet. 2000 Sep 1;9(14):2125-30. doi: 10.1093/hmg/9.14.2125.
2
Recombination-induced CAG trinucleotide repeat expansions in yeast involve the MRE11-RAD50-XRS2 complex.酵母中重组诱导的CAG三核苷酸重复序列扩增涉及MRE11-RAD50-XRS2复合物。
EMBO J. 2000 May 15;19(10):2381-90. doi: 10.1093/emboj/19.10.2381.
3
Fourteen and counting: unraveling trinucleotide repeat diseases.数量已达十四且仍在增加:破解三核苷酸重复疾病之谜。
Hum Mol Genet. 2000 Apr 12;9(6):909-16. doi: 10.1093/hmg/9.6.909.
4
Inhibition of flap endonuclease 1 by flap secondary structure and relevance to repeat sequence expansion.瓣状二级结构对瓣状核酸内切酶1的抑制作用及其与重复序列扩增的相关性。
J Biol Chem. 2000 Jun 2;275(22):16420-7. doi: 10.1074/jbc.M909635199.
5
Meiotic instability of CAG repeat tracts occurs by double-strand break repair in yeast.在酵母中,CAG重复序列的减数分裂不稳定性通过双链断裂修复发生。
Proc Natl Acad Sci U S A. 2000 Feb 29;97(5):2134-9. doi: 10.1073/pnas.040460297.
6
Inhibition of FEN-1 processing by DNA secondary structure at trinucleotide repeats.三核苷酸重复序列处的DNA二级结构对FEN-1加工的抑制作用。
Mol Cell. 1999 Dec;4(6):1079-85. doi: 10.1016/s1097-2765(00)80236-1.
7
Stabilizing effects of interruptions on trinucleotide repeat expansions in Saccharomyces cerevisiae.中断对酿酒酵母三核苷酸重复序列扩增的稳定作用。
Mol Cell Biol. 2000 Jan;20(1):173-80. doi: 10.1128/MCB.20.1.173-180.2000.
8
CGG/CCG repeats exhibit orientation-dependent instability and orientation-independent fragility in Saccharomyces cerevisiae.CGG/CCG重复序列在酿酒酵母中表现出方向依赖性不稳定性和方向独立性脆性。
Hum Mol Genet. 2000 Jan 1;9(1):93-100. doi: 10.1093/hmg/9.1.93.
9
Very large (CAG)(n) DNA repeat expansions in the sperm of two spinocerebellar ataxia type 7 males.
Hum Mol Genet. 1999 Dec;8(13):2473-8. doi: 10.1093/hmg/8.13.2473.
10
Genetic instabilities in (CTG.CAG) repeats occur by recombination.(CTG.CAG)重复序列中的基因不稳定性通过重组发生。
J Biol Chem. 1999 Aug 13;274(33):23468-79. doi: 10.1074/jbc.274.33.23468.