Basran J, Sutcliffe M J, Scrutton N S
Departments of Biochemistry and Chemistry, University of Leicester, University Road, Leicester LE1 7RH, United Kingdom.
J Biol Chem. 2001 Jul 6;276(27):24581-7. doi: 10.1074/jbc.M101178200. Epub 2001 Apr 13.
His-172 and Tyr-169 are components of a triad in the active site of trimethylamine dehydrogenase (TMADH) comprising Asp-267, His-172, and Tyr-169. Stopped-flow kinetic studies with trimethylamine as substrate have indicated that mutation of His-172 to Gln reduces the limiting rate constant for flavin reduction approximately 10-fold (Basran, J., Sutcliffe, M. J., Hille, R., and Scrutton, N. S. (1999) Biochem. J. 341, 307-314). A kinetic isotope effect (KIE = k(H)/k(D)) accompanies flavin reduction by H172Q TMADH, the magnitude of which varies significantly with solution pH. With trimethylamine, flavin reduction by H172Q TMADH is controlled by a single macroscopic ionization (pK(a) = 6.8 +/- 0.1). This ionization is perturbed (pK(a) = 7.4 +/- 0.1) in reactions with perdeuterated trimethylamine and is responsible for the apparent variation in the KIE with solution pH. At pH 9.5, where the functional group controlling flavin reduction is fully ionized, the KIE is independent of temperature in the range 277-297 K, consistent with vibrationally assisted hydrogen tunneling during breakage of the substrate C-H bond. Y169F TMADH is approximately 4-fold more compromised than H172Q TMADH for hydrogen transfer, which occurs non-classically. Studies with Y169F TMADH suggest partial thermal excitation of substrate prior to hydrogen tunneling by a vibrationally assisted mechanism. Our studies illustrate the varied effects of compromising mutations on tunneling regimes in enzyme molecules.
组氨酸-172(His-172)和酪氨酸-169(Tyr-169)是三甲胺脱氢酶(TMADH)活性位点中一个三联体的组成部分,该三联体由天冬氨酸-267(Asp-267)、组氨酸-172和酪氨酸-169构成。以三甲胺为底物进行的停流动力学研究表明,将组氨酸-172突变为谷氨酰胺(Gln)会使黄素还原的极限速率常数降低约10倍(巴斯兰,J.,萨特克利夫,M. J.,希勒,R.,以及斯克鲁顿,N. S.(1999年)《生物化学杂志》341卷,307 - 314页)。H172Q TMADH在黄素还原过程中伴随着动力学同位素效应(KIE = k(H)/k(D)),其大小随溶液pH值有显著变化。对于三甲胺,H172Q TMADH的黄素还原由单一宏观电离控制(pK(a) = 6.8 ± 0.1)。在与全氘代三甲胺的反应中,这种电离受到扰动(pK(a) = 7.4 ± 0.1),并且是导致KIE随溶液pH值明显变化的原因。在pH 9.5时,控制黄素还原的官能团完全电离,KIE在277 - 297 K范围内与温度无关,这与底物C - H键断裂过程中的振动辅助氢隧穿一致。Y169F TMADH在氢转移方面比H172Q TMADH受损程度大约高4倍,氢转移以非经典方式发生。对Y169F TMADH的研究表明,在通过振动辅助机制进行氢隧穿之前,底物会发生部分热激发。我们的研究说明了损害性突变对酶分子隧穿机制的不同影响。