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铀的M吸收边处的多波长反常衍射分析

Multiwavelength anomalous diffraction analysis at the M absorption edges of uranium.

作者信息

Liu Y, Ogata C M, Hendrickson W A

机构信息

Department of Biochemistry and Molecular Biophysics, Columbia University, New York, NY 10032, USA.

出版信息

Proc Natl Acad Sci U S A. 2001 Sep 11;98(19):10648-53. doi: 10.1073/pnas.191003998. Epub 2001 Aug 28.

DOI:10.1073/pnas.191003998
PMID:11526210
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC58520/
Abstract

The multiwavelength anomalous diffraction (MAD) method for phase evaluation is now widely used in macromolecular crystallography. Successful MAD structure determinations have been carried out at the K or L absorption edges of a variety of elements. In this study, we investigate the anomalous scattering properties of uranium at its M(IV) (3.326 A) and M(V) (3.490 A) edge. Fluorescence spectra showed remarkably strong anomalous scattering at these edges (f' = -70e, f" = 80e at the M(IV) edge and f' = -90e, f" = 105e at the M(V) edge), many times higher than from any anomalous scatterers used previously for MAD phasing. However, the large scattering angles and high absorption at the low energies of these edges present some difficulties not found in typical crystallographic studies. We conducted test experiments at the M(IV) edge with crystals of porcine elastase derivatized with uranyl nitrate. A four-wavelength MAD data set complete to 3.2-A Bragg spacings was collected from a single small frozen crystal. Analysis of the data yielded satisfactory phase information (average difference of (0)phi(T) - (0)phi(A) for replicated determinations is 32 degrees ) and produced an interpretable electron-density map. Our results demonstrate that it is practical to measure macromolecular diffraction data at these edges with current instrumentation and that phase information of good accuracy can be extracted from such experiments. We show that such experiments have potential for the phasing of very large macromolecular assemblages.

摘要

用于相位评估的多波长反常衍射(MAD)方法目前在大分子晶体学中被广泛使用。已在多种元素的K或L吸收边成功完成了MAD结构测定。在本研究中,我们研究了铀在其M(IV)(3.326 Å)和M(V)(3.490 Å)边的反常散射特性。荧光光谱显示在这些边上有非常强的反常散射(在M(IV)边f' = -70e,f" = 80e;在M(V)边f' = -90e,f" = 105e),比以前用于MAD定相的任何反常散射体的散射要强许多倍。然而,这些边在低能量处的大散射角和高吸收带来了一些典型晶体学研究中未发现的困难。我们用硝酸铀酰衍生化的猪弹性蛋白酶晶体在M(IV)边进行了测试实验。从单个小的冷冻晶体收集了一个完整到3.2 Å布拉格间距的四波长MAD数据集。对数据的分析产生了令人满意的相位信息(重复测定的(0)φ(T) - (0)φ(A)的平均差值为32度),并生成了可解释的电子密度图。我们的结果表明,用当前仪器在这些边上测量大分子衍射数据是可行的,并且可以从这类实验中提取出高精度的相位信息。我们表明,这类实验对于非常大的大分子聚集体的定相具有潜力。