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用于X射线晶体学的硒衍生化核苷和寡核苷酸的合成。

Synthesis of selenium-derivatized nucleosides and oligonucleotides for X-ray crystallography.

作者信息

Carrasco N, Ginsburg D, Du Q, Huang Z

机构信息

Department of Chemistry, Brooklyn College, The Graduate School of The City University of New York, 11210, USA.

出版信息

Nucleosides Nucleotides Nucleic Acids. 2001 Sep;20(9):1723-34. doi: 10.1081/NCN-100105907.

DOI:10.1081/NCN-100105907
PMID:11580197
Abstract

We report here the synthesis of nucleoside and oligonucleotide analogs containing selenium, which serves as an anomalous scattering center to enable MAD phase determination in nucleotide X-ray crystallography. We have developed a phase transfer approach to introduce the selenium functionality in A, C, G, T, and U nucleosides at 5'-positions. In the incorporation of the selenium functionality, the leaving groups (bromide, mesyl, and tosyl) were readily displaced by sodium selenide, sodium diselenide, and sodium methyl selenide with yields higher than 90%. Selenium-derivatized oligonucleotides have been synthesized via phosphoramidite chemistry.

摘要

我们在此报告含硒核苷和寡核苷酸类似物的合成,硒作为反常散射中心,可用于核苷酸X射线晶体学中的多波长反常散射(MAD)相位测定。我们开发了一种相转移方法,在A、C、G、T和U核苷的5'-位引入硒官能团。在引入硒官能团的过程中,离去基团(溴化物、甲磺酰基和对甲苯磺酰基)很容易被硒化钠、二硒化钠和甲基硒化钠取代,产率高于90%。已通过亚磷酰胺化学合成了硒衍生化的寡核苷酸。

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