Suzuki M, Nakagawa Y, Harayama S, Yamamoto S
Int J Syst Evol Microbiol. 2001 Sep;51(Pt 5):1639-1652. doi: 10.1099/00207713-51-5-1639.
Bacterial strains were isolated from sponge and green algae which were collected on the coast of Japan and Palau. The phylogenetic relationships of these isolates among marine species of the Cytophaga-Flavobacterium-Bacteroides complex were analysed by using their gyrB nucleotide sequences and translated peptide sequences (GyrB) in addition to 16S rDNA sequences. These isolates were closely related to the previously characterized marine Flexibacter species, [Flexibacter] maritimus and [Flexibacter] ovolyticus. These Flexibacter species are distantly related to Flexibacter flexilis, the type species of the genus Flexibacter, and phylogenetically belong to the family Flavobacteriaceae (according to analysis using both 16S rDNA and GyrB sequences). Their phylogenetic, chemotaxonomic and phenotypic characteristics prompted the proposal that these two species should be transferred to the new genus Tenacibaculum, as Tenacibaculum maritimum and Tenacibaculum ovolyticum, respectively. Two additional new species of the genus Tenacibaculum, Tenacibaculum mesophilum gen. nov., sp. nov. (= MBIC 1140T = IFO 16307T) and Tenacibaculum amylolyticum gen. nov., sp. nov. (= MBIC 4355T = IFO 16310T), which were isolated from sponges and macroalgae, are also reported. For taxonomic considerations at the species level, the resolution of gyrB sequences was superior to that of 16S rDNA sequences, and the grouping based on the gyrB phylogram was consistent with DNA-DNA hybridization results.
从采集于日本和帕劳海岸的海绵及绿藻中分离出细菌菌株。除了16S rDNA序列外,还利用这些菌株的gyrB核苷酸序列及其翻译后的肽序列(GyrB),分析了它们在噬细胞-黄杆菌-拟杆菌复合体海洋物种中的系统发育关系。这些分离菌株与先前鉴定的海洋弯曲杆菌属物种,即[弯曲杆菌]海生种和[弯曲杆菌]溶卵种密切相关。这些弯曲杆菌属物种与弯曲杆菌属的模式种柔韧弯曲杆菌亲缘关系较远,根据16S rDNA和GyrB序列分析,在系统发育上属于黄杆菌科。它们的系统发育、化学分类和表型特征促使人们提议将这两个物种分别转移到新属海栖杆菌属,命名为海栖海生杆菌和海栖溶卵杆菌。还报道了另外两个海栖杆菌属新物种,嗜中温海栖杆菌新属,新种(=MBIC 1140T = IFO 16307T)和淀粉酶解海栖杆菌新属,新种(=MBIC 4355T = IFO 16310T),它们是从海绵和大型藻类中分离得到的。出于物种水平分类学考虑,gyrB序列的分辨率优于16S rDNA序列,基于gyrB系统发育树的分组与DNA-DNA杂交结果一致。