土壤、根际和根表微生物群落随作物种类、土壤类型及作物生长发育的变化。
Variation of microbial communities in soil, rhizosphere, and rhizoplane in response to crop species, soil type, and crop development.
作者信息
Wieland G, Neumann R, Backhaus H
机构信息
Federal Biological Research Centre for Agriculture and Forestry, Institute for Plant Virology, Microbiology and Biosafety, Braunschweig, Germany.
出版信息
Appl Environ Microbiol. 2001 Dec;67(12):5849-54. doi: 10.1128/AEM.67.12.5849-5854.2001.
Abstract
We investigated the influence of plant species, soil type, and plant development time on the shaping of microbial communities in soil and in association with roots. The sample group consisted of a total of 32 microcosms in three habitats: soil, rhizosphere, and rhizoplane. Communities were represented by the patterns of a sequence-specific separation of rRNA target sequences. Effects of experimental parameters were classified by a cluster analysis of pattern similarities. The type of plant species (clover, bean, or alfalfa) had the greatest effect in plant-associated habitats and also affected soil patterns. Plant development had a minor habitat-dependent effect that was partly obscured by replicate variation. The results stress the applicability of biased community representations in an analysis of induced variation.
摘要
我们研究了植物种类、土壤类型和植物发育时间对土壤及根际微生物群落形成的影响。样本组共有32个微观世界，分布在三个生境中：土壤、根际和根表。群落通过rRNA靶序列的序列特异性分离模式来表示。通过模式相似性的聚类分析对实验参数的影响进行分类。植物种类（三叶草、豆类或苜蓿）在与植物相关的生境中影响最大，也影响土壤模式。植物发育对生境的依赖性较小，部分被重复变异所掩盖。结果强调了有偏差的群落表示法在诱导变异分析中的适用性。
相似文献
1
Variation of microbial communities in soil, rhizosphere, and rhizoplane in response to crop species, soil type, and crop development.土壤、根际和根表微生物群落随作物种类、土壤类型及作物生长发育的变化。
Appl Environ Microbiol. 2001 Dec;67(12):5849-54. doi: 10.1128/AEM.67.12.5849-5854.2001.
2
Links between plant and rhizoplane bacterial communities in grassland soils, characterized using molecular techniques.利用分子技术表征草地土壤中植物与根际平面细菌群落之间的联系。
Appl Environ Microbiol. 2005 Nov;71(11):6784-92. doi: 10.1128/AEM.71.11.6784-6792.2005.
3
Impact of flooding on soil bacterial communities associated with poplar (Populus sp.) trees.洪水对杨树（Populus sp.）相关土壤细菌群落的影响。
FEMS Microbiol Ecol. 2005 Aug 1;53(3):401-15. doi: 10.1016/j.femsec.2005.01.009.
4
Effects of above-ground plant species composition and diversity on the diversity of soil-borne microorganisms.地上植物物种组成和多样性对土壤微生物多样性的影响。
Antonie Van Leeuwenhoek. 2002 Aug;81(1-4):509-20. doi: 10.1023/a:1020565523615.
5
Analysis of bacterial communities in the rhizosphere of chrysanthemum via denaturing gradient gel electrophoresis of PCR-amplified 16S rRNA as well as DNA fragments coding for 16S rRNA.通过对PCR扩增的16S rRNA以及编码16S rRNA的DNA片段进行变性梯度凝胶电泳，分析菊花根际的细菌群落。
Appl Environ Microbiol. 2001 Jan;67(1):172-8. doi: 10.1128/AEM.67.1.172-178.2001.
6
Bulk and rhizosphere soil bacterial communities studied by denaturing gradient gel electrophoresis: plant-dependent enrichment and seasonal shifts revealed.通过变性梯度凝胶电泳研究的土壤和根际土壤细菌群落：揭示了植物依赖性富集和季节性变化
Appl Environ Microbiol. 2001 Oct;67(10):4742-51. doi: 10.1128/AEM.67.10.4742-4751.2001.
7
Soil and plant effects on microbial community structure.土壤和植物对微生物群落结构的影响。
Can J Microbiol. 2002 Nov;48(11):955-64. doi: 10.1139/w02-095.
8
Influence of plant developmental stage on microbial community structure and activity in the rhizosphere of three field crops.植物发育阶段对三种大田作物根际微生物群落结构和活性的影响。
FEMS Microbiol Ecol. 2008 Aug;65(2):193-201. doi: 10.1111/j.1574-6941.2008.00535.x. Epub 2008 Jul 8.
9
Differences in vegetation composition and plant species identity lead to only minor changes in soil-borne microbial communities in a former arable field.在一片曾经的耕地上，植被组成和植物物种特性的差异只会导致土壤微生物群落发生微小变化。
FEMS Microbiol Ecol. 2008 Mar;63(3):372-82. doi: 10.1111/j.1574-6941.2007.00428.x. Epub 2008 Jan 16.
10
Transgenic tobacco revealing altered bacterial diversity in the rhizosphere during early plant development.转基因烟草揭示了植物早期发育过程中根际细菌多样性的改变。
Antonie Van Leeuwenhoek. 2008 May;93(4):415-24. doi: 10.1007/s10482-007-9219-6. Epub 2008 Jan 8.
引用本文的文献
1
Unlocking the agro-physiological potential of wheat rhizoplane fungi under low P conditions using a niche-conserved consortium approach.利用生态位保守菌群方法挖掘低磷条件下小麦根际平面真菌的农业生理潜力。
J Exp Bot. 2025 May 27;76(8):2320-2337. doi: 10.1093/jxb/eraf042.
2
Stratified Effects of Tillage and Crop Rotations on Soil Microbes in Carbon and Nitrogen Cycles at Different Soil Depths in Long-Term Corn, Soybean, and Wheat Cultivation.长期种植玉米、大豆和小麦时，耕作和作物轮作对不同土壤深度参与碳氮循环的土壤微生物的分层效应
Microorganisms. 2024 Aug 10;12(8):1635. doi: 10.3390/microorganisms12081635.
3
Soil microbial community are more sensitive to ecological regions than cropping systems in alpine annual grassland of the Qinghai-Tibet Plateau.在青藏高原高寒一年生草地中，土壤微生物群落对生态区域的敏感性高于种植系统。
Front Microbiol. 2024 Mar 15;15:1345235. doi: 10.3389/fmicb.2024.1345235. eCollection 2024.
4
Peanut-based intercropping systems altered soil bacterial communities, potential functions, and crop yield.花生间作系统改变了土壤细菌群落、潜在功能和作物产量。
PeerJ. 2024 Feb 7;12:e16907. doi: 10.7717/peerj.16907. eCollection 2024.
5
Composition and Distribution Characteristics of Rhizosphere Bacterial Community of Ammodendron bifolium Growing in Takeermohuer Desert Are Different from Those in Non-rhizosphere.生长于塔克拉玛干沙漠的多枝柽柳根际与非根际土壤细菌群落组成及分布特征存在差异。
Microb Ecol. 2023 Nov;86(4):2461-2476. doi: 10.1007/s00248-023-02252-4. Epub 2023 Jun 10.
6
Impact of sterilization and chemical fertilizer on the microbiota of oil palm seedlings.灭菌和化肥对油棕幼苗微生物群的影响。
Front Microbiol. 2023 Apr 27;14:1091755. doi: 10.3389/fmicb.2023.1091755. eCollection 2023.
7
Colonization Ability of NCD-2 in Different Crops and Its Effect on Rhizosphere Microorganisms.NCD-2在不同作物中的定殖能力及其对根际微生物的影响
Microorganisms. 2023 Mar 17;11(3):776. doi: 10.3390/microorganisms11030776.
8
Heavy Metal Pollution Impacts Soil Bacterial Community Structure and Antimicrobial Resistance at the Birmingham 35th Avenue Superfund Site.重金属污染对伯明翰第35大道超级基金场地的土壤细菌群落结构及抗微生物耐药性产生影响。
Microbiol Spectr. 2023 Mar 23;11(2):e0242622. doi: 10.1128/spectrum.02426-22.
9
Daylily intercropping: Effects on soil nutrients, enzyme activities, and microbial community structure.黄花菜间作：对土壤养分、酶活性和微生物群落结构的影响。
Front Plant Sci. 2023 Feb 20;14:1107690. doi: 10.3389/fpls.2023.1107690. eCollection 2023.
10
Response of Rhizosphere Bacterial Communities to Near-Natural Forest Management and Tree Species within Chinese Fir Plantations.根际细菌群落对近自然森林管理和杉木人工林树种的响应。
Microbiol Spectr. 2023 Feb 14;11(1):e0232822. doi: 10.1128/spectrum.02328-22. Epub 2023 Jan 23.
本文引用的文献
1
The composition of fluorescent pseudomonad populations associated with roots is influenced by plant and soil type.与根相关的荧光假单胞菌种群的组成受植物和土壤类型的影响。
Appl Environ Microbiol. 1996 Jul;62(7):2449-56. doi: 10.1128/aem.62.7.2449-2456.1996.
2
Analysis of bacterial communities in the rhizosphere of chrysanthemum via denaturing gradient gel electrophoresis of PCR-amplified 16S rRNA as well as DNA fragments coding for 16S rRNA.通过对PCR扩增的16S rRNA以及编码16S rRNA的DNA片段进行变性梯度凝胶电泳，分析菊花根际的细菌群落。
Appl Environ Microbiol. 2001 Jan;67(1):172-8. doi: 10.1128/AEM.67.1.172-178.2001.
3
Variation of Microbial Rhizosphere Communities in Response to Crop Species, Soil Origin, and Inoculation with Sinorhizobium meliloti L33.微生物根际群落对作物物种、土壤来源和接种苜蓿中华根瘤菌 L33 的响应变化。
Microb Ecol. 2000 Jul;40(1):43-56. doi: 10.1007/s002480000021.
4
Quantifying microbial diversity: morphotypes, 16S rRNA genes, and carotenoids of oxygenic phototrophs in microbial mats.量化微生物多样性：微生物席中含氧光合生物的形态类型、16S rRNA基因和类胡萝卜素
Appl Environ Microbiol. 1999 Feb;65(2):422-30. doi: 10.1128/AEM.65.2.422-430.1999.
5
Analysis of the dynamics of bacterial communities in the rhizosphere of the chrysanthemum via denaturing gradient gel electrophoresis and substrate utilization patterns.通过变性梯度凝胶电泳和底物利用模式分析菊花根际细菌群落的动态变化。
Appl Environ Microbiol. 1998 Dec;64(12):4950-7. doi: 10.1128/AEM.64.12.4950-4957.1998.
6
Improvement of fragment and primer selection for mutation detection by denaturing gradient gel electrophoresis.通过变性梯度凝胶电泳改进用于突变检测的片段和引物选择
Nucleic Acids Res. 1998 Dec 1;26(23):5432-40. doi: 10.1093/nar/26.23.5432.
7
Monitoring impact of a pesticide treatment on bacterial soil communities by metabolic and genetic fingerprinting in addition to conventional testing procedures.除了传统测试程序外，通过代谢和基因指纹分析监测农药处理对土壤细菌群落的影响。
Appl Environ Microbiol. 1998 Aug;64(8):2814-21. doi: 10.1128/AEM.64.8.2814-2821.1998.
8
Application of denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) in microbial ecology.变性梯度凝胶电泳（DGGE）和温度梯度凝胶电泳（TGGE）在微生物生态学中的应用。
Antonie Van Leeuwenhoek. 1998 Jan;73(1):127-41. doi: 10.1023/a:1000669317571.
9
Determination of microbial diversity in environmental samples: pitfalls of PCR-based rRNA analysis.环境样品中微生物多样性的测定：基于PCR的rRNA分析的陷阱
FEMS Microbiol Rev. 1997 Nov;21(3):213-29. doi: 10.1111/j.1574-6976.1997.tb00351.x.
10
Temporal Changes in the Bacterial Communities of Soil, Rhizosphere, and Endorhiza Associated with Field-Grown Cucumber (Cucumis sativus L.).与田间种植黄瓜（Cucumis sativus L.）相关的土壤、根际和根内细菌群落的时间变化
Microb Ecol. 1997 Nov;34(3):210-23. doi: 10.1007/s002489900050.
Zotero 插件