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通过全基因组实时定量PCR绘制卡波西肉瘤相关疱疹病毒中的潜伏转录本

Charting latency transcripts in Kaposi's sarcoma-associated herpesvirus by whole-genome real-time quantitative PCR.

作者信息

Fakhari Farnaz D, Dittmer Dirk P

机构信息

Department of Microbiology and Immunology, The University of Oklahoma Health Science Center, Oklahoma City, Oklahoma 73104, USA.

出版信息

J Virol. 2002 Jun;76(12):6213-23. doi: 10.1128/jvi.76.12.6213-6223.2002.

DOI:10.1128/jvi.76.12.6213-6223.2002
PMID:12021355
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC136228/
Abstract

The division into a latent or lytic life cycle is fundamental to all herpesviridae. In the case of Kaposi's sarcoma-associated herpesvirus (KSHV) (human herpesvirus 8), latent genes have been implicated in cell autonomous transformation, while certain lytic genes procure a tumor friendly milieu through paracrine mechanism. To query KSHV transcription, we devised and validated a high-throughput, high-specificity, high-sensitivity, real-time quantitative reverse transcription-PCR array. This novel methodology is applicable to many human pathogens. Its first use demonstrated that the mRNA levels for KSHV LANA, v-cyclin, and v-FLIP do not increase at any time after viral reactivation. The mRNA for LANA-2/vIRF-3 is similarly resistant to viral reactivation. In contrast, every other latent or lytic message was induced. Hence, LANA, v-FLIP, v-cyclin, and LANA-2 constitute a group of uniquely regulated transcripts in the KSHV genome.

摘要

分为潜伏或裂解生命周期是所有疱疹病毒科的基本特征。就卡波西肉瘤相关疱疹病毒(KSHV,即人类疱疹病毒8型)而言,潜伏基因与细胞自主转化有关,而某些裂解基因则通过旁分泌机制营造有利于肿瘤生长的环境。为了探究KSHV转录情况,我们设计并验证了一种高通量、高特异性、高灵敏度的实时定量逆转录PCR阵列。这种新方法适用于多种人类病原体。其首次应用表明,病毒重新激活后,KSHV的LANA、v-细胞周期蛋白和v-FLIP的mRNA水平在任何时候都不会增加。LANA-2/vIRF-3的mRNA同样对病毒重新激活有抗性。相比之下,其他所有潜伏或裂解信息都被诱导。因此,LANA、v-FLIP、v-细胞周期蛋白和LANA-2构成了KSHV基因组中一组独特调控的转录本。

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本文引用的文献

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Recombination in human herpesvirus-8 strains from Uganda and evolution of the K15 gene.乌干达人类疱疹病毒8型毒株的重组及K15基因的进化
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Differential regulation of the overlapping Kaposi's sarcoma-associated herpesvirus vGCR (orf74) and LANA (orf73) promoters.卡波西肉瘤相关疱疹病毒重叠的病毒G蛋白偶联受体(vGCR,orf74)和潜伏相关核抗原(LANA,orf73)启动子的差异调控
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Human herpesvirus 8 K1-associated nuclear factor-kappa B-dependent promoter activity: role in Kaposi's sarcoma inflammation?人类疱疹病毒8型K1相关的核因子κB依赖性启动子活性:在卡波西肉瘤炎症中的作用?
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Kaposi's sarcoma-associated herpesvirus latent and lytic gene expression as revealed by DNA arrays.DNA阵列揭示的卡波西肉瘤相关疱疹病毒的潜伏和裂解基因表达
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7
Kaposi's sarcoma-associated herpesvirus LANA2 is a B-cell-specific latent viral protein that inhibits p53.卡波西肉瘤相关疱疹病毒LANA2是一种B细胞特异性潜伏病毒蛋白,可抑制p53。
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Mucosal shedding of human herpesvirus 8 in men.男性中人类疱疹病毒8的黏膜脱落
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Molecular evidence of organ-related transmission of Kaposi sarcoma-associated herpesvirus or human herpesvirus-8 in transplant patients.移植患者中卡波西肉瘤相关疱疹病毒或人类疱疹病毒8器官相关传播的分子证据。
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